RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RPP40O75818 363 aaKnown RBP10.09□□□□□ -0.79
SSBP3-215ENST00000533946 ADH1CP00326 375 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 KRT5P13647 590 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 PON1P27169 355 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 HOXA6P31267 233 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 SLC6A4P31645 630 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 GPD2P43304 727 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 PLA2G4AP47712 749 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 ID4P47928 161 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 PDE6CP51160 858 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 DGKEP52429 567 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 BCAT1P54687 386 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 GAD2Q05329 585 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 BST2Q10589 180 aaKnown RBP10.09□□□□□ -0.79
SSBP3-215ENST00000533946 NR1H3Q13133 447 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 CNGA2Q16280 664 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 CRY1Q16526 586 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 PLK5Q496M5 336 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 C10orf76Q5T2E6 689 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 NADSYN1Q6IA69 706 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 RFWD3Q6PCD5 774 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 TRIM65Q6PJ69 517 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 CEP68Q76N32 757 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 PASD1Q8IV76 773 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 TERB1Q8NA31 727 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 FAM126AQ9BYI3 521 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-215ENST00000533946 GTPBP4Q9BZE4 634 aaKnown RBP10.09□□□□□ -0.79
SSBP3-215ENST00000533946 UBXN6Q9BZV1 441 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 MTG2Q9H4K7 406 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 CACNA2D2Q9NY47 1150 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 HOOK1Q9UJC3 728 aaKnown RBP10.09□□□□□ -0.79
SSBP3-215ENST00000533946 CNTN6Q9UQ52 1028 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 NAALADL1Q9UQQ1 740 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 BICDL2A1A5D9 508 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 FOXN3O00409 490 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-215ENST00000533946 SLC9A3R1O14745 358 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-215ENST00000533946 PAPSS1O43252 624 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-215ENST00000533946 CACNG3O60359 315 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-215ENST00000533946 APBB3O95704 486 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 APODP05090 189 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 CLCN1P35523 988 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 GRIA2P42262 883 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
SSBP3-215ENST00000533946 NRLP54845 237 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 C2CD6Q53TS8 623 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 KLHDC10Q6PID8 442 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 C11orf57Q6ZUT1 292 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-215ENST00000533946 ARMCX6Q7L4S7 300 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 RASSF3Q86WH2 238 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 HMGB4Q8WW32 186 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 ZNF606Q8WXB4 792 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 KCTD13Q8WZ19 329 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 CCDC34Q96HJ3 373 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 IER2Q9BTL4 223 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 LRRC4Q9HBW1 653 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 SEMA4GQ9NTN9 838 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 TMEM74BQ9NUR3 256 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 CLIC5Q9NZA1 410 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 MARK1Q9P0L2 795 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 CALCOCO1Q9P1Z2 691 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 TBC1D14Q9P2M4 693 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 DEC1Q9P2X7 70 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 FBXO10Q9UK96 956 aa10.08□□□□□ -0.8
SSBP3-215ENST00000533946 CHD8Q9HCK8 2581 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 MUC22E2RYF6 1773 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TCRBV21S2A2A0A5A6 115 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 E5RJQ4 531 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 EPHB6O15197 1021 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 PENKP01210 267 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 RETP07949 1114 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 PAEPP09466 180 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 CCDC192P0DO97 292 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 HLA-EP13747 358 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 GABRG2P18507 467 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TFE3P19532 575 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TBXAS1P24557 533 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 USP8P40818 1118 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 PTGER3P43115 390 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 IRAK1P51617 712 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 MFAP3P55082 362 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 GCNT1Q02742 428 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TRIP4Q15650 581 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 FBXO43Q4G163 708 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 RAB6CQ53S08 254 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 FAM133BQ5BKY9 247 aaKnown RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 BTBD8Q5XKL5 378 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 LAIR1Q6GTX8 287 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 GRAMD4Q6IC98 578 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 FOXR2Q6PJQ5 311 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 MMS22LQ6ZRQ5 1243 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 CLEC17AQ6ZS10 378 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 RSRC2Q7L4I2 434 aaKnown RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms