RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
SVIP-205ENST00000533774 USP49Q70CQ1 688 aa13□□□□□ -0.33
SVIP-205ENST00000533774 DYMQ7RTS9 669 aa13□□□□□ -0.33
SVIP-205ENST00000533774 GATAD2AQ86YP4 633 aa13□□□□□ -0.33
SVIP-205ENST00000533774 FMNL3Q8IVF7 1028 aa13□□□□□ -0.33
SVIP-205ENST00000533774 RBBP8NLQ8NC74 664 aaPredicted RBP13□□□□□ -0.33
SVIP-205ENST00000533774 TMC2Q8TDI7 906 aa13□□□□□ -0.33
SVIP-205ENST00000533774 NOC3LQ8WTT2 800 aaKnown RBP13□□□□□ -0.33
SVIP-205ENST00000533774 IGSF8Q969P0 613 aa13□□□□□ -0.33
SVIP-205ENST00000533774 MMS19Q96T76 1030 aa13□□□□□ -0.33
SVIP-205ENST00000533774 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
SVIP-205ENST00000533774 NUP58Q9BVL2 599 aa13□□□□□ -0.33
SVIP-205ENST00000533774 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
SVIP-205ENST00000533774 CLMPQ9H6B4 373 aa13□□□□□ -0.33
SVIP-205ENST00000533774 OSER1Q9NX31 292 aa13□□□□□ -0.33
SVIP-205ENST00000533774 WDR35Q9P2L0 1181 aa13□□□□□ -0.33
SVIP-205ENST00000533774 FTSJ1Q9UET6 329 aa13□□□□□ -0.33
SVIP-205ENST00000533774 LIMCH1Q9UPQ0 1083 aa13□□□□□ -0.33
SVIP-205ENST00000533774 TDRD6O60522 2096 aaKnown RBP13□□□□□ -0.33
SVIP-205ENST00000533774 RRP8O43159 456 aaKnown RBP12.99□□□□□ -0.33
SVIP-205ENST00000533774 TACC1O75410 805 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 GARTP22102 1010 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 CCT8P50990 548 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 SLC5A3P53794 718 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 CXADRP78310 365 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 HMGN5P82970 282 aaKnown RBP12.99□□□□□ -0.33
SVIP-205ENST00000533774 STARD3Q14849 445 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 C6orf118Q5T5N4 469 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 ARL6IP4Q66PJ3 421 aaKnown RBP12.99□□□□□ -0.33
SVIP-205ENST00000533774 SPACA3Q8IXA5 215 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 OR6B3Q8NGW1 331 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 LARP4BQ92615 738 aaKnown RBP12.99□□□□□ -0.33
SVIP-205ENST00000533774 CALML4Q96GE6 196 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 ACCSQ96QU6 501 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 SNX25Q9H3E2 840 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 CLEC4EQ9ULY5 219 aa12.99□□□□□ -0.33
SVIP-205ENST00000533774 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.99□□□□□ -0.33
SVIP-205ENST00000533774 ENC1O14682 589 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 MDM4O15151 490 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
SVIP-205ENST00000533774 SLC26A4O43511 780 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 BRINP1O60477 761 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 TLR5O60602 858 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 BEST1O76090 585 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 LDHAP00338 332 aaKnown RBP12.98□□□□□ -0.33
SVIP-205ENST00000533774 KRT10P13645 584 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 UBA7P41226 1012 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 GRIA4P48058 902 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 MFAP3P55082 362 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 ZNF234Q14588 700 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 SHBQ15464 509 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 RILPL1Q5EBL4 403 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 HES3Q5TGS1 186 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 TMEM215Q68D42 235 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 FBXL19Q6PCT2 694 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 Q6ZNB5 142 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 FAM35AQ86V20 835 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 ERICH1Q86X53 443 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 CBWD2Q8IUF1 395 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 FAM181AQ8N9Y4 354 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 B3GALNT2Q8NCR0 500 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 SORCS1Q8WY21 1168 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 PRCCQ92733 491 aaPredicted RBP12.98□□□□□ -0.33
SVIP-205ENST00000533774 BIRC7Q96CA5 298 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 DNAJC19Q96DA6 116 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 AK8Q96MA6 479 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 NRSN2Q9GZP1 204 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 MRPL44Q9H9J2 332 aaKnown RBP12.98□□□□□ -0.33
SVIP-205ENST00000533774 OSGEPQ9NPF4 335 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 SLC27A6Q9Y2P4 619 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 PCDHGA1Q9Y5H4 931 aa12.98□□□□□ -0.33
SVIP-205ENST00000533774 ERVH48-1M5A8F1 160 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 TNNC2P02585 160 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 ACADVLP49748 655 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 LY6DQ14210 128 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 FYB2Q5VWT5 728 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 KRI1Q8N9T8 703 aaKnown RBP12.97□□□□□ -0.33
SVIP-205ENST00000533774 FGF11Q92914 225 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 PIWIL1Q96J94 861 aaKnown RBP12.97□□□□□ -0.33
SVIP-205ENST00000533774 SMOQ99835 787 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 PCED1AQ9H1Q7 454 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 NUDT5Q9UKK9 219 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 NYNRINQ9P2P1 1898 aaKnown RBP12.97□□□□□ -0.33
SVIP-205ENST00000533774 KIF26BQ2KJY2 2108 aa12.97□□□□□ -0.33
SVIP-205ENST00000533774 A0A1B0GTQ1 180 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 A8MXQ7 604 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 TSPAN3O60637 253 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 RFPL3O75679 317 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 GCNT3O95395 438 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 PENKP01210 267 aaPredicted RBP12.96□□□□□ -0.33
SVIP-205ENST00000533774 KLKB1P03952 638 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 HNF1BP35680 557 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 CDH8P55286 799 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 FOXK1P85037 733 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 SRSF1Q07955 248 aaKnown RBP eCLIP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms