RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 NAT10Q9H0A0 1025 aaKnown RBP16.07■□□□□ 0.16
CPSF1-210ENST00000532935 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 PLCB1Q9NQ66 1216 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 MARK1Q9P0L2 795 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 LIMA1Q9UHB6 759 aaKnown RBP16.07■□□□□ 0.16
CPSF1-210ENST00000532935 SFMBT1Q9UHJ3 866 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 PCDHGC3Q9UN70 934 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 HBS1LQ9Y450 684 aaKnown RBP16.07■□□□□ 0.16
CPSF1-210ENST00000532935 PRR23AA6NEV1 266 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 E5RJQ4 531 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 NEDD8-MDP1E9PL57 170 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 TULP3O75386 442 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 KAT7O95251 611 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 APODP05090 189 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 CDK11BP21127 795 aaKnown RBP16.06■□□□□ 0.16
CPSF1-210ENST00000532935 BPIFB4P59827 614 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 PDCLQ13371 301 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 TRIP4Q15650 581 aaPredicted RBP16.06■□□□□ 0.16
CPSF1-210ENST00000532935 TMEM110Q86TL2 294 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 SFTPA1Q8IWL2 248 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 PHTF2Q8N3S3 785 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 WDTC1Q8N5D0 677 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 CCDC26Q8TAB7 109 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 BBS2Q9BXC9 721 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 GANQ9H2C0 597 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 HSD3B7Q9H2F3 369 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 ARHGEF4Q9NR80 690 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 WDR35Q9P2L0 1181 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 AGO1Q9UL18 857 aaKnown RBP16.06■□□□□ 0.16
CPSF1-210ENST00000532935 FAM186AA6NE01 2351 aa16.06■□□□□ 0.16
CPSF1-210ENST00000532935 A0A0A0MRY4 1105 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 PAPSS1O43252 624 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-210ENST00000532935 SART1O43290 800 aaKnown RBP16.05■□□□□ 0.16
CPSF1-210ENST00000532935 CACNG3O60359 315 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 LILRB5O75023 590 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 TYRP14679 529 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 KRT9P35527 623 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 GRIA2P42262 883 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 KLK7P49862 253 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 SEC13P55735 322 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 DMWDQ09019 674 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 KLHL40Q2TBA0 621 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 SKOR2Q2VWA4 1001 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-210ENST00000532935 PREPLQ4J6C6 727 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-210ENST00000532935 DENND1CQ8IV53 801 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 USP33Q8TEY7 942 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 ACDQ96AP0 544 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 FAM149B1Q96BN6 582 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 XPO6Q96QU8 1125 aaKnown RBP16.05■□□□□ 0.16
CPSF1-210ENST00000532935 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 STK33Q9BYT3 514 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 LHX5Q9H2C1 402 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 DEC1Q9P2X7 70 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 SLC8A2Q9UPR5 921 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 ZNF292O60281 2723 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 CFAP54Q96N23 3096 aa16.05■□□□□ 0.16
CPSF1-210ENST00000532935 SPAG17Q6Q759 2223 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 ANTXRLA6NF34 631 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 LRRC10BA6NIK2 292 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 LGALS16A8MUM7 142 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 F8VZ95 297 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 MSI1O43347 362 aaKnown RBP16.04■□□□□ 0.16
CPSF1-210ENST00000532935 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
CPSF1-210ENST00000532935 FYNP06241 537 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 NCAM1P13591 858 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 HOXA6P31267 233 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 HOXC13P31276 330 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 CHKAP35790 457 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 FNTBP49356 437 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 HARS2P49590 506 aaKnown RBP16.04■□□□□ 0.16
CPSF1-210ENST00000532935 C2orf27AQ580R0 203 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 SYT13Q7L8C5 426 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 BHMTQ93088 406 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 PPP1R13BQ96KQ4 1090 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 CPXM1Q96SM3 734 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 FAM207AQ9NSI2 230 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-210ENST00000532935 DNAJC17Q9NVM6 304 aaKnown RBP16.04■□□□□ 0.16
CPSF1-210ENST00000532935 POLR3BQ9NW08 1133 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-210ENST00000532935 TJP2Q9UDY2 1190 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 SIK3Q9Y2K2 1263 aa16.04■□□□□ 0.16
CPSF1-210ENST00000532935 TBC1D3BA6NDS4 549 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 TRIM24O15164 1050 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 CYP11B1P15538 503 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 TNFRSF4P43489 277 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 POLR2FP61218 127 aaKnown RBP16.03■□□□□ 0.16
CPSF1-210ENST00000532935 MRPS21P82921 87 aaKnown RBP16.03■□□□□ 0.16
CPSF1-210ENST00000532935 SYCP1Q15431 976 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 HEATR6Q6AI08 1181 aaKnown RBP16.03■□□□□ 0.16
CPSF1-210ENST00000532935 GRAMD4Q6IC98 578 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 BEND5Q7L4P6 421 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 APTXQ7Z2E3 356 aaKnown RBP16.03■□□□□ 0.16
CPSF1-210ENST00000532935 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
CPSF1-210ENST00000532935 FAM217AQ8IXS0 508 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 CPXM2Q8N436 756 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 C1orf131Q8NDD1 294 aaKnown RBP16.03■□□□□ 0.16
CPSF1-210ENST00000532935 DQX1Q8TE96 717 aaKnown RBP16.03■□□□□ 0.16
CPSF1-210ENST00000532935 P2RY11Q96G91 374 aa16.03■□□□□ 0.16
CPSF1-210ENST00000532935 NOX5Q96PH1 765 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms