RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 RALAP11233 206 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 LCP1P13796 627 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 PPP1R2P41236 205 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 TNFRSF4P43489 277 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 CSRP2Q16527 193 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 FYB2Q5VWT5 728 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 GRAMD4Q6IC98 578 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 DENND1CQ8IV53 801 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 ZNF513Q8N8E2 541 aaPredicted RBP18.66■□□□□ 0.58
SMG1-203ENST00000532700 OLIG1Q8TAK6 271 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 SLC35F5Q8WV83 523 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 CNOT6LQ96LI5 555 aaKnown RBP18.66■□□□□ 0.58
SMG1-203ENST00000532700 CD93Q9NPY3 652 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 MBD1Q9UIS9 605 aaPredicted RBP18.66■□□□□ 0.58
SMG1-203ENST00000532700 LSM7Q9UK45 103 aaKnown RBP18.66■□□□□ 0.58
SMG1-203ENST00000532700 CEP192Q8TEP8 1941 aa18.66■□□□□ 0.58
SMG1-203ENST00000532700 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.65■□□□□ 0.58
SMG1-203ENST00000532700 A0A1W2PQF6 199 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 TCRBV21S2A2A0A5A6 115 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 DCDC2BA2VCK2 349 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.65■□□□□ 0.58
SMG1-203ENST00000532700 M0QYV0 167 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 PENKP01210 267 aaPredicted RBP18.65■□□□□ 0.58
SMG1-203ENST00000532700 AFPP02771 609 aaKnown RBP18.65■□□□□ 0.58
SMG1-203ENST00000532700 PAEPP09466 180 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 DAOAP59103 153 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 YWHAEP62258 255 aaKnown RBP18.65■□□□□ 0.58
SMG1-203ENST00000532700 LMNB2Q03252 620 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 PUM1Q14671 1186 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMG1-203ENST00000532700 PLA2G2CQ5R387 149 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 BTBD8Q5XKL5 378 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 KIAA1211LQ6NV74 962 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 DGLUCYQ7Z3D6 616 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 HMGB4Q8WW32 186 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 KCTD13Q8WZ19 329 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 CRACR2AQ9BSW2 395 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 SLC6A17Q9H1V8 727 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 HESX1Q9UBX0 185 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 CYTH4Q9UIA0 394 aa18.65■□□□□ 0.58
SMG1-203ENST00000532700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMG1-203ENST00000532700 WASH3PC4AMC7 463 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 P4HA2O15460 535 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 SLC9A1P19634 815 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 SGSHP51688 502 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 GCNT1Q02742 428 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 BSPRYQ5W0U4 402 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 DENND1BQ6P3S1 775 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 RSRC2Q7L4I2 434 aaKnown RBP18.64■□□□□ 0.57
SMG1-203ENST00000532700 FMNL3Q8IVF7 1028 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 GPR161Q8N6U8 529 aaKnown RBP18.64■□□□□ 0.57
SMG1-203ENST00000532700 TRIML1Q8N9V2 468 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 LRRC4Q9HBW1 653 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 RWDD2AQ9UIY3 292 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 FBXO10Q9UK96 956 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 RAD54BQ9Y620 910 aa18.64■□□□□ 0.57
SMG1-203ENST00000532700 BECN2A8MW95 431 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 LRP3O75074 770 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 SETSIPP0DME0 302 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 GABRG2P18507 467 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 MPLP40238 635 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 GOLGA8FQ08AF8 430 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 GOLGA8DPQ0D2H9 430 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 CNGA2Q16280 664 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 GEN1Q17RS7 908 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 DPCR1Q3MIW9 517 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 PMS2CLQ68D20 193 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 ERMP1Q7Z2K6 904 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 FAM217AQ8IXS0 508 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 DNAI2Q9GZS0 605 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 CLSTN2Q9H4D0 955 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 LMBRD1Q9NUN5 540 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 CACNA2D2Q9NY47 1150 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 TJP2Q9UDY2 1190 aa18.63■□□□□ 0.57
SMG1-203ENST00000532700 PATE3B3GLJ2 98 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 GFRA2O00451 464 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 TSPAN3O60637 253 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 FYNP06241 537 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 GBP1P32455 592 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 P2RY2P41231 377 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 DGKGP49619 791 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 MFAP3P55082 362 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 COG7P83436 770 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 TRIP4Q15650 581 aaPredicted RBP18.62■□□□□ 0.57
SMG1-203ENST00000532700 MAP7D1Q3KQU3 841 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 EOGTQ5NDL2 527 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 TMEM215Q68D42 235 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 SIX6OS1Q8N1H7 587 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 ARHGAP18Q8N392 663 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 MYEOVQ96EZ4 313 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 LOXL4Q96JB6 756 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 SIX2Q9NPC8 291 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 UBE2TQ9NPD8 197 aaPredicted RBP18.62■□□□□ 0.57
SMG1-203ENST00000532700 WDR35Q9P2L0 1181 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 CDV3Q9UKY7 258 aaKnown RBP18.62■□□□□ 0.57
SMG1-203ENST00000532700 STARD13Q9Y3M8 1113 aa18.62■□□□□ 0.57
SMG1-203ENST00000532700 LAMA1P25391 3075 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 GNA14O95837 355 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 ZNF806P0C7X5 589 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 PNMA6AP0CW24 399 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms