RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SYNCRIPO60506 623 aaKnown RBP8.71□□□□□ -1.01
CTNND1-227ENST00000530748 KRT34O76011 436 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 AMHP03971 560 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 DUX4L2P0CJ85 424 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 DUX4L3P0CJ86 424 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 DUX4L4P0CJ87 422 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 DUX4L5P0CJ88 424 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 DUX4L6P0CJ89 424 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 DUX4L7P0CJ90 424 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 RRM1P23921 792 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 PSMA3P25788 255 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 MAD2L1Q13257 205 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-227ENST00000530748 NBPF12Q5TAG4 269 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-227ENST00000530748 SLC27A1Q6PCB7 646 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 WDR48Q8TAF3 677 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 SPIRE2Q8WWL2 714 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 DUX4Q9UBX2 424 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 COL3A1P02461 1466 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-227ENST00000530748 PXDNQ92626 1479 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 M0R3G1 203 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 AKAP3O75969 853 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 STAU1O95793 577 aaKnown RBP8.71□□□□□ -1.01
CTNND1-227ENST00000530748 TFE3P19532 575 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-227ENST00000530748 NPY2RP49146 381 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 SEC24CP53992 1094 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 PRKAA2P54646 552 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 SOX10P56693 466 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 TBX4P57082 545 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 PREPLQ4J6C6 727 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-227ENST00000530748 KIAA2013Q8IYS2 634 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 FBXL16Q8N461 479 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 SOCS4Q8WXH5 440 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 OSMRQ99650 979 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 GPAMQ9HCL2 828 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 SETD4Q9NVD3 440 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 TMEM131LA2VDJ0 1609 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 PAEPP09466 180 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 PYGMP11217 842 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 SOX6P35712 828 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 GLRBP48167 497 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 NDST1P52848 882 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 SLC12A3P55017 1021 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 MRPS15P82914 257 aaKnown RBP8.71□□□□□ -1.02
CTNND1-227ENST00000530748 PRMT9Q6P2P2 845 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 CCDC81Q6ZN84 652 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 LPCAT1Q8NF37 534 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 OSGEPQ9NPF4 335 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 GPRC5DQ9NZD1 345 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 LNPEPQ9UIQ6 1025 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 TSPAN16Q9UKR8 245 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 TRPV2Q9Y5S1 764 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 FRMPD4Q14CM0 1322 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 A0A087X1B8 175 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 CBX4O00257 560 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 TPBGLP0DKB5 382 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 CYP2A6P11509 494 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-227ENST00000530748 TCF3P15923 654 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 BGNP21810 368 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 GRK2P25098 689 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 RANBP1P43487 201 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 CLK1P49759 484 aaKnown RBP8.71□□□□□ -1.02
CTNND1-227ENST00000530748 MGAT5Q09328 741 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 CSHL1Q14406 222 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 DNAJB3Q8WWF6 145 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 JADE3Q92613 823 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 TATDN2Q93075 761 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 SH3GL1Q99961 368 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 NOD2Q9HC29 1040 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 THG1LQ9NWX6 298 aaKnown RBP8.71□□□□□ -1.02
CTNND1-227ENST00000530748 USE1Q9NZ43 259 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 PDP2Q9P2J9 529 aa8.71□□□□□ -1.02
CTNND1-227ENST00000530748 ADGRB1O14514 1584 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 WDR27A2RRH5 827 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MANSC4A6NHS7 340 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MYL4P12829 197 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 SLC1A6P48664 564 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 AQP5P55064 265 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 NME5P56597 212 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PTENP60484 403 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 ADRM1Q16186 407 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PKN2Q16513 984 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 ATP6AP1LQ52LC2 224 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 LRRC8DQ7L1W4 858 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 KIAA0895Q8NCT3 520 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 REPS2Q8NFH8 660 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MRPL48Q96GC5 212 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 SIKE1Q9BRV8 207 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 UXTQ9UBK9 157 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 HAO1Q9UJM8 370 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 COPG1Q9Y678 874 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 DUSP10Q9Y6W6 482 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MGAT4DA6NG13 374 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 UBXN8O00124 270 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CPA3P15088 417 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CRABP2P29373 138 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 GPC1P35052 558 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MRPS35P82673 323 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 GPR141Q7Z602 305 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PTAR1Q7Z6K3 402 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms