RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 FAM90A18PA6NE21 464 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 FAM90A16PA6NEW6 464 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 FAM90A9PA6NNJ1 464 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 FAM90A5PA8MXJ8 464 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 IRAK2O43187 625 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 RAMP2O60895 175 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 RPP40O75818 363 aaKnown RBP6.84□□□□□ -1.31
CASP4-208ENST00000530309 PDE8BO95263 885 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 FAM90A15PP0C7V4 464 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 FAM90A14PP0C7W9 464 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 ZNF37AP17032 561 aaPredicted RBP6.84□□□□□ -1.31
CASP4-208ENST00000530309 MMP8P22894 467 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 FPR3P25089 353 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 ACVRL1P37023 503 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 LMAN2Q12907 356 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 TAF5Q15542 800 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 ERCC6LQ2NKX8 1250 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 KRT27Q7Z3Y8 459 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 ZNF804AQ7Z570 1209 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 MRGPRGQ86SM5 289 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 LDLRAD3Q86YD5 345 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 RASAL3Q86YV0 1011 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 ANKRD18AQ8IVF6 992 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 SLC22A17Q8WUG5 538 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 TBC1D5Q92609 795 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 VPS16Q9H269 839 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 ALG13Q9NP73 1137 aaKnown RBP6.84□□□□□ -1.31
CASP4-208ENST00000530309 CNTN6Q9UQ52 1028 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 ENTPD2Q9Y5L3 495 aa6.84□□□□□ -1.31
CASP4-208ENST00000530309 EFCAB8A8MWE9 144 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 MGST3O14880 152 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 PPP6R2O75170 966 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 FAM155BO75949 473 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 TXNL4AP83876 142 aaKnown RBP6.83□□□□□ -1.32
CASP4-208ENST00000530309 TSTD2Q5T7W7 516 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 SLC29A4Q7RTT9 530 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 MOGAT3Q86VF5 341 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 SUGP1Q8IWZ8 645 aaKnown RBP6.83□□□□□ -1.32
CASP4-208ENST00000530309 GCC1Q96CN9 775 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 MCRS1Q96EZ8 462 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 TRAPPC9Q96Q05 1148 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 CINPQ9BW66 212 aaPredicted RBP6.83□□□□□ -1.32
CASP4-208ENST00000530309 BRD8Q9H0E9 1235 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 SAP30LQ9HAJ7 183 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 VPS45Q9NRW7 570 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 FBXO28Q9NVF7 368 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 KIF17Q9P2E2 1029 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 SLC17A6Q9P2U8 582 aa6.83□□□□□ -1.32
CASP4-208ENST00000530309 CCDC189A1A4V9 331 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 KIF28PB7ZC32 967 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 SUV39H1O43463 412 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 LARGE1O95461 756 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 TMIGD3P0DMS9 266 aaPredicted RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 PROZP22891 400 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 GDF5P43026 501 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 CACNA2D1P54289 1103 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 CCDC15Q0P6D6 951 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 FHL2Q14192 279 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 RNASE12Q5GAN4 147 aaKnown RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 C12orf76Q8N812 135 aaPredicted RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 FAM71DQ8N9W8 422 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 CAGE1Q8TC20 777 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 PRR11Q96HE9 360 aaPredicted RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 BBC3Q96PG8 261 aaPredicted RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 TIMP4Q99727 224 aa6.82□□□□□ -1.32
CASP4-208ENST00000530309 TAF1DQ9H5J8 278 aaPredicted RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 ELAC1Q9H777 363 aaKnown RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.82□□□□□ -1.32
CASP4-208ENST00000530309 C19orf53Q9UNZ5 99 aaPredicted RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 UBE2J1Q9Y385 318 aaPredicted RBP6.82□□□□□ -1.32
CASP4-208ENST00000530309 CCDC187A0A096LP49 1063 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 M0QZQ0 153 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 ZNF213O14771 459 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 NPHP1O15259 732 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 ALADP13716 330 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 ADD2P35612 726 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 CDK7P50613 346 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 INHBCP55103 352 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 SOX10P56693 466 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 CYP4F2P78329 520 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 GPC5P78333 572 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 DPTQ07507 201 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 KLF10Q13118 480 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 ZNF569Q5MCW4 686 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 TTC22Q5TAA0 569 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 KIRREL2Q6UWL6 708 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 OLFML1Q6UWY5 402 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 NAPRTQ6XQN6 538 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 RINLQ6ZS11 566 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 TERB1Q8NA31 727 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 OR6Y1Q8NGX8 325 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 SPPL3Q8TCT6 385 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 THAP4Q8WY91 577 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 EDC3Q96F86 508 aaKnown RBP6.81□□□□□ -1.32
CASP4-208ENST00000530309 SNX18Q96RF0 628 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 CIPCQ9C0C6 399 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 CCDC134Q9H6E4 229 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 USP29Q9HBJ7 922 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 KCNK9Q9NPC2 374 aa6.81□□□□□ -1.32
CASP4-208ENST00000530309 IL17RBQ9NRM6 502 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms