RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CCNE1P24864 410 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 PPP1R2P41236 205 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 ACOT2P49753 483 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 SCNN1GP51170 649 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 ZXDAP98168 799 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 POU5F1Q01860 360 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 DSC1Q08554 894 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 MYBPC2Q14324 1141 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 EDRF1Q3B7T1 1238 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 NOMO2Q5JPE7 1267 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 FOXR2Q6PJQ5 311 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 GLB1LQ6UWU2 654 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 ETV3LQ6ZN32 361 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 CBWD2Q8IUF1 395 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 HACE1Q8IYU2 909 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 ARHGEF39Q8N4T4 335 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 RSPH1Q8WYR4 309 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 P2RX5Q93086 422 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 DHTKD1Q96HY7 919 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 LOXL4Q96JB6 756 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 ZMAT2Q96NC0 199 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 YME1L1Q96TA2 773 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 CCDC94Q9BW85 323 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 PCIF1Q9H4Z3 704 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 CWH43Q9H720 699 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 TBC1D13Q9NVG8 400 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 FBLN5Q9UBX5 448 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 STXBP5LQ9Y2K9 1186 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 INSL6Q9Y581 213 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 MRPL42Q9Y6G3 142 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 XIRP2A4UGR9 3374 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 KIAA1671Q9BY89 1806 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 SPTBN5Q9NRC6 3674 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 TTC28Q96AY4 2481 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 GOLGA8IPA6NC78 632 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 GOLGA8JA6NMD2 632 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 PSMA7O14818 248 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 DDHD2O94830 711 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 RPL13P26373 211 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 CASP4P49662 377 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 CYP2J2P51589 502 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 FANCCQ00597 558 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 SMAD4Q13485 552 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 RAB30Q15771 203 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 KYAT1Q16773 422 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 PAN2Q504Q3 1202 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 ZNF394Q53GI3 561 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 ANKRD40Q6AI12 368 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 ZC3H18Q86VM9 953 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 CPNE8Q86YQ8 564 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 LRRC43Q8N309 656 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 GPD1LQ8N335 351 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 MLKLQ8NB16 471 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 XXYLT1Q8NBI6 393 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 PLEKHO2Q8TD55 490 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 NELFBQ8WX92 580 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 TIFAQ96CG3 184 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 ACAP3Q96P50 834 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 PPP1R10Q96QC0 940 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 FAM213AQ9BRX8 229 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 PRDM12Q9H4Q4 367 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 PTPRJQ12913 1337 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 ANK1P16157 1881 aa9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 PDCD11Q14690 1871 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-217ENST00000530253 SMIM28A0A1B0GU29 152 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 LACTBL1A8MY62 500 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 CALUO43852 315 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 AKAP3O75969 853 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 LDHAP00338 332 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 POMCP01189 267 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 EPHX1P07099 455 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 NR2F2P24468 414 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 THBS2P35442 1172 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 MATR3P43243 847 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 TAP1Q03518 808 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 LRRC63Q05C16 580 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 GRIK3Q13003 919 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 PAK1Q13153 545 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 BTG3Q14201 252 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 ZBTB6Q15916 424 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 SNRNP35Q16560 246 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 GLRA4Q5JXX5 417 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 KLHL10Q6JEL2 608 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 C11orf57Q6ZUT1 292 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 ZNF280BQ86YH2 543 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 EFCAB13Q8IY85 973 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 COLGALT2Q8IYK4 626 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 KYQ8NBH2 561 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 SYAP1Q96A49 352 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 C11orf84Q9BUA3 381 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 MRPL9Q9BYD2 267 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 NRDE2Q9H7Z3 1164 aa9.44□□□□□ -0.9
CCDC90B-217ENST00000530253 RPF1Q9H9Y2 349 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms