RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CEP295NLQ96MC4 621 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 PEBP4Q96S96 227 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
TTC39A-216ENST00000530004 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 PRRC2BQ5JSZ5 2229 aaKnown RBP15.01□□□□□ -0.01
TTC39A-216ENST00000530004 TNFRSF10BO14763 440 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 LINC01565O15544 149 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 RFPL2O75678 378 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 HEXIM1O94992 359 aaKnown RBP15.01□□□□□ -0.01
TTC39A-216ENST00000530004 LRG1P02750 347 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 HOXA9P31269 272 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 MATKP42679 507 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 SLC5A3P53794 718 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 COPS2P61201 443 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 PLD1Q13393 1074 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 CYP1B1Q16678 543 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 SCYL2Q6P3W7 929 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 DENND5BQ6ZUT9 1274 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 STKLD1Q8NE28 680 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 CCDC26Q8TAB7 109 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 GIPC2Q8TF65 315 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 RUBCNQ92622 972 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
TTC39A-216ENST00000530004 NCAPGQ9BPX3 1015 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 ZDHHC7Q9NXF8 308 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 SZT2Q5T011 3432 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 PTPRDP23468 1912 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 PLXNA3P51805 1871 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 CCDC151A5D8V7 595 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 YJEFN3A6XGL0 299 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 E7ENQ6 273 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 ZBED1O96006 694 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 KRT10P13645 584 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 CHRNA3P32297 505 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 EPHB3P54753 998 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 HDAC4P56524 1084 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 KLF1Q13351 362 aaPredicted RBP15□□□□□ -0.01
TTC39A-216ENST00000530004 ADAM15Q13444 863 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 DCAF6Q58WW2 860 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 KAZNQ674X7 775 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 HFE2Q6ZVN8 426 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 MAATS1Q7Z4T9 603 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 NUP93Q8N1F7 819 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 MICALL1Q8N3F8 863 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 KCTD6Q8NC69 237 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 CENPIQ92674 756 aaPredicted RBP15□□□□□ -0.01
TTC39A-216ENST00000530004 SLC2A13Q96QE2 648 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 TBCBQ99426 244 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 POPDC2Q9HBU9 364 aa15□□□□□ -0.01
TTC39A-216ENST00000530004 hCG_1818297A0A087WSY0 165 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 ZSCAN5CA6NGD5 496 aaPredicted RBP14.99□□□□□ -0.01
TTC39A-216ENST00000530004 C3orf70A6NLC5 250 aaPredicted RBP14.99□□□□□ -0.01
TTC39A-216ENST00000530004 SPDYE4A6NLX3 237 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 TTI1O43156 1089 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 HNRNPA1P09651 372 aaKnown RBP eCLIP14.99□□□□□ -0.01
TTC39A-216ENST00000530004 KDELR1P24390 212 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 NOS2P35228 1153 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 PTPN7P35236 360 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 CDKN2BP42772 138 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 SULT1E1P49888 294 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 GUCY2DQ02846 1103 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 MTMR3Q13615 1198 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 VEPH1Q14D04 833 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 CTC1Q2NKJ3 1217 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 SLC25A52Q3SY17 297 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 TFDP3Q5H9I0 405 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 CYP4V2Q6ZWL3 525 aaPredicted RBP14.99□□□□□ -0.01
TTC39A-216ENST00000530004 CMASQ8NFW8 434 aaPredicted RBP14.99□□□□□ -0.01
TTC39A-216ENST00000530004 SCAMP5Q8TAC9 235 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 C1orf54Q8WWF1 131 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 PSMG2Q969U7 264 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 ADAM33Q9BZ11 813 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.99□□□□□ -0.01
TTC39A-216ENST00000530004 DZANK1Q9NVP4 752 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.99□□□□□ -0.01
TTC39A-216ENST00000530004 TRANK1O15050 2925 aa14.99□□□□□ -0.01
TTC39A-216ENST00000530004 SLC38A8A6NNN8 435 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CAPN9O14815 690 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CCL16O15467 120 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ERLIN1O75477 346 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 TJP3O95049 919 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 FYNP06241 537 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CD48P09326 243 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CSH1P0DML2 217 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CSH2P0DML3 217 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 SRGAP2BP0DMP2 458 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 FOSL2P15408 326 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ATXN1P54253 815 aaKnown RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 USP46P62068 366 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 DR1Q01658 176 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ADCY2Q08462 1091 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 DHX34Q14147 1143 aaKnown RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 COL19A1Q14993 1142 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 PM20D1Q6GTS8 502 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 TTC27Q6P3X3 843 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CCDC137Q6PK04 289 aaKnown RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 STRADAQ7RTN6 431 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 BHLHA9Q7RTU4 235 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 DNAJB7Q7Z6W7 309 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ITIH5Q86UX2 942 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms