RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 CRELD2Q6UXH1 353 aaPredicted RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 NCCRP1Q6ZVX7 275 aaPredicted RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 RUFY3Q7L099 469 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 UBE3BQ7Z3V4 1068 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 DDX42Q86XP3 938 aaKnown RBP eCLIP4.29□□□□□ -1.72
CTR9-205ENST00000529898 SLC7A5P1Q8MH63 180 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 CARNMT1Q8N4J0 409 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 RNF10Q8N5U6 811 aaKnown RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 ESX1Q8N693 406 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 CNTD1Q8N815 330 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 DCBLD1Q8N8Z6 715 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 C1orf162Q8NEQ5 155 aaPredicted RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 CAGE1Q8TC20 777 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 BRSK1Q8TDC3 778 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 NRG4Q8WWG1 115 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 ZNF653Q96CK0 615 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 ERP27Q96DN0 273 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 MARS2Q96GW9 593 aaKnown RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 SLC2A13Q96QE2 648 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 SPAG5Q96R06 1193 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 TRIM5Q9C035 493 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 CLK4Q9HAZ1 481 aaKnown RBP4.29□□□□□ -1.72
CTR9-205ENST00000529898 PARVBQ9HBI1 364 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 SPC25Q9HBM1 224 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 TMEM165Q9HC07 324 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 FKBP14Q9NWM8 211 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 SLC5A4Q9NY91 659 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 STK39Q9UEW8 545 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 DNM3Q9UQ16 869 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 PCDHGB3Q9Y5G1 929 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 KIF1BO60333 1816 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 ATP10BO94823 1461 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 NPATQ14207 1427 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 ERBINQ96RT1 1412 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 TET3O43151 1660 aa4.29□□□□□ -1.72
CTR9-205ENST00000529898 AATKQ6ZMQ8 1374 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 USP32Q8NFA0 1604 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 TRPM2O94759 1503 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 ASXL1Q8IXJ9 1541 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.28□□□□□ -1.72
CTR9-205ENST00000529898 GOLGA6L7A0A1B0GV03 622 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 A0A1W2PS29 197 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 CLRN2A0PK11 232 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 TMEM247A6NEH6 219 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 C2orf81A6NN90 581 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 SRRM3A6NNA2 597 aaPredicted RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 LRRIQ3A6PVS8 624 aaPredicted RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 E9PMD0 336 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 FOXN3O00409 490 aaPredicted RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 ZSCAN12O43309 604 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 TSPAN1O60635 241 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 YEATS4O95619 227 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 S100A6P06703 90 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 VIMP08670 466 aaKnown RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 PDGFRBP09619 1106 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 HSPA8P11142 646 aaKnown RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 ATP5DP30049 168 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 SLC6A4P31645 630 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 UBXN2AP68543 259 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 CDC42EP1Q00587 391 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 ITIH3Q06033 890 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 TARDBPQ13148 414 aaKnown RBP eCLIP4.28□□□□□ -1.72
CTR9-205ENST00000529898 NAA25Q14CX7 972 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 BCL2A1Q16548 175 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 PABPC1LQ4VXU2 614 aaKnown RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 FAM133BQ5BKY9 247 aaKnown RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 CCSAPQ6IQ19 270 aaPredicted RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 NEPROQ6NW34 567 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 FOXR2Q6PJQ5 311 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 RD3Q7Z3Z2 195 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 MAATS1Q7Z4T9 603 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 ZNF804AQ7Z570 1209 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 NANOGNBQ7Z5D8 188 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 RAB11FIP4Q86YS3 637 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 COLGALT2Q8IYK4 626 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 SLC44A3Q8N4M1 653 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 PAF1Q8N7H5 531 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 SPC24Q8NBT2 197 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 APPL2Q8NEU8 664 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 IL17RDQ8NFM7 739 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 GDAP1Q8TB36 358 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 FAM71BQ8TC56 605 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 IFI44Q8TCB0 444 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 IFT81Q8WYA0 676 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 JADE3Q92613 823 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 ZNF75CPQ92670 426 aaPredicted RBP4.28□□□□□ -1.72
CTR9-205ENST00000529898 DPF2Q92785 391 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 P3H4Q92791 437 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 KAT2BQ92831 832 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 NELL1Q92832 810 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 GTF3C6Q969F1 213 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 OPTNQ96CV9 577 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 HVCN1Q96D96 273 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 RNF31Q96EP0 1072 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 UROC1Q96N76 676 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 FAM167BQ9BTA0 163 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 LRFN3Q9BTN0 628 aa4.28□□□□□ -1.72
CTR9-205ENST00000529898 C11orf54Q9H0W9 315 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms