RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 KCNK16Q96T55 309 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 GABRG3Q99928 467 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 LLPHQ9BRT6 129 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 MED10Q9BTT4 135 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 B3GNT5Q9BYG0 378 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SNX25Q9H3E2 840 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 MRPL44Q9H9J2 332 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 TBC1D14Q9P2M4 693 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 NUDT5Q9UKK9 219 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SNX11Q9Y5W9 270 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 CABIN1Q9Y6J0 2220 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 A8MXQ7 604 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SMAPO00193 183 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ATXN7O15265 892 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 FLRT2O43155 660 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 TLR5O60602 858 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 PRPF6O94906 941 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 TNNC2P02585 160 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 HLA-EP13747 358 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 PFKLP17858 780 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 PTPN1P18031 435 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 GNL1P36915 607 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 DGKGP49619 791 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 TPMTP51580 245 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 STARD3Q14849 445 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 MAPRE1Q15691 268 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 L1TD1Q5T7N2 865 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 NUDT18Q6ZVK8 323 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 GATAD2AQ86YP4 633 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 CBWD2Q8IUF1 395 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SCUBE3Q8IX30 993 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 CYP4X1Q8N118 509 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 NUP93Q8N1F7 819 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 GALNT15Q8N3T1 639 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF366Q8N895 744 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 KRI1Q8N9T8 703 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SORCS1Q8WY21 1168 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 DNASE2BQ8WZ79 361 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 NAF1Q96HR8 494 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 CDC6Q99741 560 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ZDHHC5Q9C0B5 715 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ELOVL4Q9GZR5 314 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 PRORYQ9H606 182 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 C6orf106Q9H6K1 298 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 INTS13Q9NVM9 706 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 WSB2Q9NYS7 404 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 KIAA1522Q9P206 1035 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 DKK4Q9UBT3 224 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 NXF1Q9UBU9 619 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 STARD13Q9Y3M8 1113 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 STON1Q9Y6Q2 735 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 TEX15Q9BXT5 2789 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 H0Y8X5 98 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CYP26A1O43174 497 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CACNG3O60359 315 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 GREM1O60565 184 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DKK1O94907 266 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CST3P01034 146 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 HMBSP08397 361 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DLATP10515 647 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CCDC130P13994 396 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 IDEP14735 1019 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SCP2P22307 547 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PRKCHP24723 683 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PPP3CCP48454 512 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 RPIAP49247 311 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CDH8P55286 799 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 TNNC1P63316 161 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CXADRP78310 365 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CCDC173Q0VFZ6 552 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DNAJC3Q13217 504 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 POSTNQ15063 836 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SMAD1Q15797 465 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 GEN1Q17RS7 908 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PREPLQ4J6C6 727 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 RILPL1Q5EBL4 403 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 KCNT1Q5JUK3 1230 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PCSK4Q6UW60 755 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 GPRIN1Q7Z2K8 1008 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 LIMS2Q7Z4I7 341 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 FAM35AQ86V20 835 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 TMPRSS6Q8IU80 811 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 GPD1LQ8N335 351 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 RDH13Q8NBN7 331 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 B3GALNT2Q8NCR0 500 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 HPS3Q969F9 1004 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 OTUB2Q96DC9 234 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SIPA1Q96FS4 1042 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 EPSTI1Q96J88 318 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 XPO6Q96QU8 1125 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 ST6GALNAC4Q9H4F1 302 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SMYD3Q9H7B4 428 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 TM9SF3Q9HD45 589 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 KRT82Q9NSB4 513 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 OSER1Q9NX31 292 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 EHD2Q9NZN4 543 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 USP36Q9P275 1121 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 FTSJ1Q9UET6 329 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DNMT3LQ9UJW3 386 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms