RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PIAS2O75928 621 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 TNFRSF6BO95407 300 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 GLP2RO95838 553 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 PECAM1P16284 738 aaPredicted RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 NPPBP16860 134 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 SLC5A2P31639 672 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 BCAT1P54687 386 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 HOXA4Q00056 320 aaPredicted RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 NSUN2Q08J23 767 aaKnown RBP eCLIP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 FOXF2Q12947 444 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 PROSER3Q2NL68 480 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 MZT2AQ6P582 158 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 LVRNQ6Q4G3 990 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 KIRREL2Q6UWL6 708 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 SUGP1Q8IWZ8 645 aaKnown RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 PNLDC1Q8NA58 520 aaKnown RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 RSC1A1Q92681 617 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 DAZAP1Q96EP5 407 aaKnown RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 ZDHHC12Q96GR4 267 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 ZBTB45Q96K62 511 aaPredicted RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 TBATAQ96M53 351 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 LENG8Q96PV6 779 aaPredicted RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 PRPF18Q99633 342 aaKnown RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 NAP1L4Q99733 375 aaKnown RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 CIPCQ9C0C6 399 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 TMOD4Q9NZQ9 345 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 ZNF69Q9UC07 566 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 HERC5Q9UII4 1024 aaKnown RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 HPSEQ9Y251 543 aa5.31□□□□□ -1.56
C11orf88-204ENST00000529661 DRG1Q9Y295 367 aaKnown RBP5.31□□□□□ -1.56
C11orf88-204ENST00000529661 CGB1A6NKQ9 187 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 TISP43B9A030 160 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 CES2O00748 559 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 CD3EAPO15446 510 aaKnown RBP5.3□□□□□ -1.56
C11orf88-204ENST00000529661 WDHD1O75717 1129 aaPredicted RBP5.3□□□□□ -1.56
C11orf88-204ENST00000529661 TJP3O95049 919 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 CDK4P11802 303 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 HGFP14210 728 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 MST1P26927 711 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 EPHA3P29320 983 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 UQCRC1P31930 480 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 SUMO2P61956 95 aaKnown RBP5.3□□□□□ -1.56
C11orf88-204ENST00000529661 KRTAP1-1Q07627 177 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 ATP1A4Q13733 1029 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 SRSF7Q16629 238 aaKnown RBP eCLIP5.3□□□□□ -1.56
C11orf88-204ENST00000529661 LIN54Q6MZP7 749 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 RFX8Q6ZV50 586 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 SIRT6Q8N6T7 355 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 TERB1Q8NA31 727 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 OR1N1Q8NGS0 311 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 HELLSQ9NRZ9 838 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 AMFRQ9UKV5 643 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 TNFRSF18Q9Y5U5 241 aa5.3□□□□□ -1.56
C11orf88-204ENST00000529661 ASNA1O43681 348 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 FAM155BO75949 473 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 ARP10275 920 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 CYP2D6P10635 497 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 LMO1P25800 156 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 GKP32189 559 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 PNLIPRP1P54315 467 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 TUBA4AP68366 448 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 FHL3Q13643 280 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 RALBP1Q15311 655 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 SULT6B1Q6IMI4 303 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 CCDC70Q6NSX1 233 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 SERPINA13PQ6UXR4 307 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 MMS22LQ6ZRQ5 1243 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 MOGAT3Q86VF5 341 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 GATAD2AQ86YP4 633 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 IL17REQ8NFR9 667 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 RSPRY1Q96DX4 576 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 ZNF668Q96K58 619 aaPredicted RBP5.29□□□□□ -1.56
C11orf88-204ENST00000529661 UBXN10Q96LJ8 280 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 FAM167BQ9BTA0 163 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 DDX23Q9BUQ8 820 aaKnown RBP5.29□□□□□ -1.56
C11orf88-204ENST00000529661 VN1R3Q9BXE9 311 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 SLC25A32Q9H2D1 315 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 PABPC3Q9H361 631 aaKnown RBP5.29□□□□□ -1.56
C11orf88-204ENST00000529661 TP63Q9H3D4 680 aaPredicted RBP5.29□□□□□ -1.56
C11orf88-204ENST00000529661 DNAJB11Q9UBS4 358 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 LPAR3Q9UBY5 353 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.29□□□□□ -1.56
C11orf88-204ENST00000529661 SRP68Q9UHB9 627 aaKnown RBP5.29□□□□□ -1.56
C11orf88-204ENST00000529661 VPS51Q9UID3 782 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 GJD2Q9UKL4 321 aa5.29□□□□□ -1.56
C11orf88-204ENST00000529661 LRRFIP2Q9Y608 721 aaKnown RBP5.29□□□□□ -1.56
C11orf88-204ENST00000529661 DNAJC9-AS1A6NH13 148 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 PRRT4C9JH25 899 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 DHHO43323 396 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 CCNT2O60583 730 aaKnown RBP5.28□□□□□ -1.56
C11orf88-204ENST00000529661 PMPCBO75439 489 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 ANXA6P08133 673 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 CELA2AP08217 269 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 ITGA2BP08514 1039 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 CD53P19397 219 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 CST5P28325 142 aaPredicted RBP5.28□□□□□ -1.56
C11orf88-204ENST00000529661 MPGP29372 298 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 GATMP50440 423 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 PGDP52209 483 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 TAF5Q15542 800 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms