RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	CYTH4	Q9UIA0	394 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	DNAJC12	Q9UKB3	198 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	MMP17	Q9ULZ9	603 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	ZNF510	Q9Y2H8	683 aa		12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	ZNF638	Q14966	1978 aa	Known RBP	12.3	□□□□□ -0.44
PSMC3-205	ENST00000528362	HELZ	P42694	1942 aa	Known RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	CCDC163	A0A0D9SF12	145 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	TBC1D3B	A6NDS4	549 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	MSI1	O43347	362 aa	Known RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	MED7	O43513	233 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	FBXO21	O94952	628 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	KLF8	O95600	359 aa	Predicted RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	APBB3	O95704	486 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	MBD3	O95983	291 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	PENK	P01210	267 aa	Predicted RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	LTF	P02788	710 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	PNMA6A	P0CW24	399 aa	Predicted RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	HNRNPL	P14866	589 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	EEF1G	P26641	437 aa	Known RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	CNR2	P34972	360 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	TNFRSF4	P43489	277 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	MRPS21	P82921	87 aa	Known RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	KCNMA1	Q12791	1236 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	CDKAL1	Q5VV42	579 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	FYB2	Q5VWT5	728 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	GRAMD4	Q6IC98	578 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	TOGARAM2	Q6ZUX3	1019 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	DENND1C	Q8IV53	801 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	FAM217A	Q8IXS0	508 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	CAMKK1	Q8N5S9	505 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	ALLC	Q8N6M5	410 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	TXNDC5	Q8NBS9	432 aa	Known RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	STK32A	Q8WU08	396 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	PLD4	Q96BZ4	506 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	HINFP	Q9BQA5	517 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	ZDHHC4	Q9NPG8	344 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	ST7	Q9NRC1	585 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	ABCC13	Q9NSE7	274 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	TAB2	Q9NYJ8	693 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	PLK2	Q9NYY3	685 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	HCN2	Q9UL51	889 aa		12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	HBS1L	Q9Y450	684 aa	Known RBP	12.29	□□□□□ -0.44
PSMC3-205	ENST00000528362	DMXL1	Q9Y485	3027 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362		E5RJQ4	531 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	SGK1	O00141	431 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	FOXN3	O00409	490 aa	Predicted RBP	12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	PES1	O00541	588 aa	Known RBP	12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	AXIN1	O15169	862 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	ADAM23	O75077	832 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	FYN	P06241	537 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	CISD3	P0C7P0	127 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	TIE1	P35590	1138 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	CHKA	P35790	457 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	ACADSB	P45954	432 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	PDCL	Q13371	301 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	SIM2	Q14190	667 aa	Predicted RBP	12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	CRY1	Q16526	586 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	PREPL	Q4J6C6	727 aa	Predicted RBP	12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	C10orf76	Q5T2E6	689 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	CCDC183	Q5T5S1	534 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	KLHDC7A	Q5VTJ3	777 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	SMYD5	Q6GMV2	418 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	PRR23B	Q6ZRT6	265 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	TMEM110	Q86TL2	294 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	SCUBE3	Q8IX30	993 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	FAM71A	Q8IYT1	594 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	TSTD1	Q8NFU3	115 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	GAB3	Q8WWW8	586 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	XPO6	Q96QU8	1125 aa	Known RBP	12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	SLC4A5	Q9BY07	1137 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	ANO10	Q9NW15	660 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	NCDN	Q9UBB6	729 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	TJP2	Q9UDY2	1190 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	EBF1	Q9UH73	591 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	FBXO10	Q9UK96	956 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	FHOD1	Q9Y613	1164 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	ZNF292	O60281	2723 aa		12.28	□□□□□ -0.44
PSMC3-205	ENST00000528362	PRRT4	C9JH25	899 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	GFRA2	O00451	464 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	PAPSS1	O43252	624 aa	Predicted RBP	12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	SART1	O43290	800 aa	Known RBP	12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	IGLV3-27	P01718	113 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	CLCN1	P35523	988 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	HARS2	P49590	506 aa	Known RBP	12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	DGKG	P49619	791 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	RAPGEF1	Q13905	1077 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	KRT31	Q15323	416 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	STX1A	Q16623	288 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	HSF5	Q4G112	596 aa	Predicted RBP	12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	LAIR1	Q6GTX8	287 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	SASS6	Q6UVJ0	657 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	TMEM92	Q6UXU6	159 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	SLC47A2	Q86VL8	602 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	RASSF3	Q86WH2	238 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	PASD1	Q8IV76	773 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	CPXM2	Q8N436	756 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	WDTC1	Q8N5D0	677 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	DQX1	Q8TE96	717 aa	Known RBP	12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	GOLGA1	Q92805	767 aa		12.27	□□□□□ -0.45
PSMC3-205	ENST00000528362	FAM149B1	Q96BN6	582 aa		12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms