RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 MFSD6LQ8IWD5 586 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 CELF5Q8N6W0 485 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 ADAM32Q8TC27 787 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 SH3RF2Q8TEC5 729 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 RXFP2Q8WXD0 754 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 FAM149B1Q96BN6 582 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 CHFRQ96EP1 664 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 PGAP3Q96FM1 320 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 FCRL2Q96LA5 508 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 CCDC42Q96M95 316 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 GCNAQ96QF7 691 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 MAGEB5Q9BZ81 275 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 METTL5Q9NRN9 209 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 ZNHIT6Q9NWK9 470 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 MARCH2Q9P0N8 246 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 DNMT3LQ9UJW3 386 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 FAM50BQ9Y247 325 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 NR2E1Q9Y466 385 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 EPN1Q9Y6I3 576 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 COL4A3Q01955 1670 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 ANKRD62A6NC57 917 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 KCNU1A8MYU2 1149 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 EIF3CLB5ME19 914 aaKnown RBP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 SCAMP3O14828 347 aaKnown RBP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 NARSO43776 548 aaKnown RBP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 AKR1B10O60218 316 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 NDUFA10O95299 355 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 TRUB2O95900 331 aaKnown RBP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 CKMP06732 381 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 KRT3P12035 628 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 AVPR1AP37288 418 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 GRM2Q14416 872 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 TCEAL1Q15170 157 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 TOGARAM2Q6ZUX3 1019 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 CCDC170Q8IYT3 715 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 ADGRG2Q8IZP9 1017 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 GJD3Q8N144 294 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 ZFYVE19Q96K21 471 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 CFAP57Q96MR6 1250 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 TBCBQ99426 244 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 EIF3CQ99613 913 aaKnown RBP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 SLITRK6Q9H5Y7 841 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 SYNCQ9H7C4 482 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 HPS4Q9NQG7 708 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 CFAP97Q9P2B7 532 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 IGSF9Q9P2J2 1179 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 XPO7Q9UIA9 1087 aaKnown RBP11.24□□□□□ -0.61
NEDD8-205ENST00000527046 SALL4Q9UJQ4 1053 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 STRIP2Q9ULQ0 834 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 MYOFQ9NZM1 2061 aa11.24□□□□□ -0.61
NEDD8-205ENST00000527046 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 DPYSL4O14531 572 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 IRAK2O43187 625 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 H2AFZP0C0S5 128 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 TMEM253P0C7T8 217 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 ABCB4P21439 1286 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 PTPN9P43378 593 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 CXCR3P49682 368 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 SNX16P57768 344 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 GPC5P78333 572 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
NEDD8-205ENST00000527046 C15orf59Q2T9L4 293 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-205ENST00000527046 SLC25A52Q3SY17 297 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 H2AFVQ71UI9 128 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 CPNE8Q86YQ8 564 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 MIB1Q86YT6 1006 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 BPIFB1Q8TDL5 484 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 NXPE3Q969Y0 559 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 ZNF653Q96CK0 615 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 MYEOVQ96EZ4 313 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 LACRTQ9GZZ8 138 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 KCNF1Q9H3M0 494 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 TMPRSS4Q9NRS4 437 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 OLA1Q9NTK5 396 aaKnown RBP11.23□□□□□ -0.61
NEDD8-205ENST00000527046 PIGVQ9NUD9 493 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 PARVAQ9NVD7 372 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 STOML2Q9UJZ1 356 aa11.23□□□□□ -0.61
NEDD8-205ENST00000527046 HBS1LQ9Y450 684 aaKnown RBP11.23□□□□□ -0.61
NEDD8-205ENST00000527046 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 E2F8A0AVK6 867 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 M0QYT0 321 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 MYBL1P10243 752 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 ARSAP15289 507 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 PSMC3P17980 439 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 MAGEA1P43355 309 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 ZNF143P52747 638 aaPredicted RBP11.22□□□□□ -0.61
NEDD8-205ENST00000527046 HDAC4P56524 1084 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 GSDMDP57764 484 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms