RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 SLC18A3Q16572 532 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 ITPRIPL2Q3MIP1 535 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 STXBP5Q5T5C0 1151 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 PASD1Q8IV76 773 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 SCN4BQ8IWT1 228 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 C1orf131Q8NDD1 294 aaKnown RBP18.12■□□□□ 0.49
CCS-204ENST00000526066 KCTD13Q8WZ19 329 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 EXOC4Q96A65 974 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 ZFYVE19Q96K21 471 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 SPATA17Q96L03 361 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 HSFY1Q96LI6 401 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 SEPT5Q99719 369 aaPredicted RBP18.12■□□□□ 0.49
CCS-204ENST00000526066 LRRC3Q9BY71 257 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 SEPT11Q9NVA2 429 aaKnown RBP18.12■□□□□ 0.49
CCS-204ENST00000526066 ZMYM5Q9UJ78 669 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 NENFQ9UMX5 172 aa18.12■□□□□ 0.49
CCS-204ENST00000526066 PTPRDP23468 1912 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 A0A087X0T9 212 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 HHLA1C9JL84 531 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 AXIN1O15169 862 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 AKR1B10O60218 316 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 GDF9O60383 454 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 RPP40O75818 363 aaKnown RBP18.11■□□□□ 0.49
CCS-204ENST00000526066 BEST1O76090 585 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 FAM228BP0C875 321 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 CYLC1P35663 651 aaPredicted RBP18.11■□□□□ 0.49
CCS-204ENST00000526066 CDR1P51861 262 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 AMPD2Q01433 879 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 GRSF1Q12849 480 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCS-204ENST00000526066 NAA35Q5VZE5 725 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 TXNDC11Q6PKC3 985 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 PIGZQ86VD9 579 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 LOXL4Q96JB6 756 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 KCNK16Q96T55 309 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCS-204ENST00000526066 SLC4A5Q9BY07 1137 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 TASP1Q9H6P5 420 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 NAGPAQ9UK23 515 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 SLC8A2Q9UPR5 921 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 GREB1Q4ZG55 1949 aa18.11■□□□□ 0.49
CCS-204ENST00000526066 SOWAHDA6NJG2 315 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 TULP2O00295 520 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 LCA5LO95447 670 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 ACADSBP45954 432 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 LIMK1P53667 647 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 SNX16P57768 344 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 PDCLQ13371 301 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 CCINQ13939 588 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 ACAD10Q6JQN1 1059 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 PMF1Q6P1K2 205 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 GAREM2Q75VX8 874 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 TMEM110Q86TL2 294 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 PHF13Q86YI8 300 aaPredicted RBP18.1■□□□□ 0.49
CCS-204ENST00000526066 MSANTD4Q8NCY6 345 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 GAB3Q8WWW8 586 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 ARRDC1-AS1Q9H2J1 176 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 COMMD8Q9NX08 183 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 EPN1Q9Y6I3 576 aaPredicted RBP18.1■□□□□ 0.49
CCS-204ENST00000526066 SPAG17Q6Q759 2223 aa18.1■□□□□ 0.49
CCS-204ENST00000526066 KIF26AQ9ULI4 1882 aaPredicted RBP18.09■□□□□ 0.49
CCS-204ENST00000526066 EIF3CLB5ME19 914 aaKnown RBP18.09■□□□□ 0.49
CCS-204ENST00000526066 TNFRSF10BO14763 440 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 ARHGAP6O43182 974 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 RTN2O75298 545 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 SOAT2O75908 522 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 ATF6P18850 670 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 MMP8P22894 467 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 AVPR1AP37288 418 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 NSFP46459 744 aaKnown RBP18.09■□□□□ 0.49
CCS-204ENST00000526066 CCZ1BP86790 482 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 CCZ1P86791 482 aaPredicted RBP18.09■□□□□ 0.49
CCS-204ENST00000526066 DDR2Q16832 855 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 RAB41Q5JT25 222 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 ALKBH5Q6P6C2 394 aaKnown RBP18.09■□□□□ 0.49
CCS-204ENST00000526066 CPA5Q8WXQ8 436 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 EIF3CQ99613 913 aaKnown RBP18.09■□□□□ 0.49
CCS-204ENST00000526066 MIS12Q9H081 205 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 ISCUQ9H1K1 167 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 LRRC4Q9HBW1 653 aa18.09■□□□□ 0.49
CCS-204ENST00000526066 CACNA1GO43497 2377 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 CCDC163A0A0D9SF12 145 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 RTN3O95197 1032 aaPredicted RBP18.08■□□□□ 0.48
CCS-204ENST00000526066 NDUFA10O95299 355 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 PRAMEF12O95522 483 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 ZNF806P0C7X5 589 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 WEE1P30291 646 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 GABRB2P47870 512 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 GPR15P49685 360 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 CYP4F8P98187 520 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 GFPT1Q06210 699 aaPredicted RBP18.08■□□□□ 0.48
CCS-204ENST00000526066 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
CCS-204ENST00000526066 TNK2Q07912 1038 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 SF3A2Q15428 464 aaKnown RBP18.08■□□□□ 0.48
CCS-204ENST00000526066 PTPN20Q4JDL3 420 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 C10orf76Q5T2E6 689 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 CC2D1AQ6P1N0 951 aaPredicted RBP18.08■□□□□ 0.48
CCS-204ENST00000526066 RAD9BQ6WBX8 426 aa18.08■□□□□ 0.48
CCS-204ENST00000526066 DENND5BQ6ZUT9 1274 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms