RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CENPVL1A0A0U1RR11 272 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 MARCH11A6NNE9 402 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 F5H6K3 240 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 CXCL11O14625 94 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 ZBTB43O43298 467 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 GPANK1O95872 356 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 ELANEP08246 267 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 CALM1P0DP23 149 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 CALM2P0DP24 149 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 CALM3P0DP25 149 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 FGFR4P22455 802 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 PAX3P23760 479 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 PDIA3P30101 505 aaKnown RBP5.08□□□□□ -1.6
USP48-211ENST00000526044 SLC6A4P31645 630 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 CYP2C19P33261 490 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 FXR1P51114 621 aaKnown RBP eCLIP5.08□□□□□ -1.6
USP48-211ENST00000526044 USP14P54578 494 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 AK2P54819 239 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 HUNKP57058 714 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 EVCP57679 992 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 NOMO3P69849 1222 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 SETQ01105 290 aaPredicted RBP5.08□□□□□ -1.6
USP48-211ENST00000526044 GUCY1B3Q02153 619 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 OCA2Q04671 838 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 ICA1Q05084 483 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 PPATQ06203 517 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 KLRC3Q07444 240 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 SPP2Q13103 211 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 RESTQ13127 1097 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 VGLL4Q14135 290 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 BECN1Q14457 450 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 PPP2R5BQ15173 497 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 SHROOM1Q2M3G4 852 aaPredicted RBP5.08□□□□□ -1.6
USP48-211ENST00000526044 NOMO2Q5JPE7 1267 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 UTP14CQ5TAP6 766 aaKnown RBP5.08□□□□□ -1.6
USP48-211ENST00000526044 FAM43AQ8N2R8 423 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 NME8Q8N427 588 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 AOPEPQ8N6M6 819 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 ACER1Q8TDN7 264 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 SNX21Q969T3 373 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 OPTNQ96CV9 577 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 MVB12AQ96EY5 273 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 PNKPQ96T60 521 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 MAP3K14Q99558 947 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 PRRX2Q99811 253 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 ZSWIM1Q9BR11 485 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 MLST8Q9BVC4 326 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 CDH19Q9H159 772 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 SH2D4AQ9H788 454 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 LY9Q9HBG7 655 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 KMT5AQ9NQR1 393 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 SIDT1Q9NXL6 827 aaKnown RBP5.08□□□□□ -1.6
USP48-211ENST00000526044 PNMA2Q9UL42 364 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 TMX2Q9Y320 296 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 AFG3L2Q9Y4W6 797 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 NOX1Q9Y5S8 564 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 DOCK1Q14185 1865 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 PLIN4Q96Q06 1357 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 CCDC196A0A1B0GTZ2 297 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 A0A1W2PRG0 241 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 LRRC14BA6NHZ5 514 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 F2RL2O00254 374 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 DHX16O60231 1041 aaKnown RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 LPXNO60711 386 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 AGFG2O95081 481 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 FTLP02792 175 aaPredicted RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 S100BP04271 92 aaPredicted RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 FTH1P19P0C7X4 201 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 KIF5BP33176 963 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 ANP32AP39687 249 aaKnown RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 GNAQP50148 359 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 HK3P52790 923 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 BACE1P56817 501 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 HSD11B2P80365 405 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 STK3Q13188 491 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 NOGQ13253 232 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 ME3Q16798 604 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 ATAT1Q5SQI0 421 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 B3GNTL1Q67FW5 361 aaPredicted RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 RGMBQ6NW40 437 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 ZNF627Q7L945 461 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 FMNL3Q8IVF7 1028 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 HSCBQ8IWL3 235 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 NECAB1Q8N987 351 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 FANCBQ8NB91 859 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 GMCL1P1Q8NEA9 526 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 CTCFLQ8NI51 663 aaPredicted RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 HPS3Q969F9 1004 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 RGMAQ96B86 450 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 BOD1Q96IK1 185 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 CLMNQ96JQ2 1002 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 MED15Q96RN5 788 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 TMOD4Q9NZQ9 345 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 ZIM2Q9NZV7 527 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 ABT1Q9ULW3 272 aaKnown RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 PCDHA3Q9Y5H8 950 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 SSC5DA1L4H1 1573 aa5.07□□□□□ -1.6
USP48-211ENST00000526044 GREB1LQ9C091 1923 aaPredicted RBP5.07□□□□□ -1.6
USP48-211ENST00000526044 PHIPQ8WWQ0 1821 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms