RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CUTAO60888 179 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CILPO75339 1184 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 GJB3O75712 270 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 STC2O76061 302 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 TRIM16O95361 564 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 F13A1P00488 732 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 HLA-DRAP01903 254 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CAPNS1P04632 268 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 FAM200BP0CF97 657 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 DPP6P42658 865 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 NASPP49321 788 aaPredicted RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 TPMTP51580 245 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CLDN6P56747 220 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 IL9RQ01113 521 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 BNC1Q01954 994 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CYP4F3Q08477 520 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 STK4Q13043 487 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 STARD3Q14849 445 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 ZNF423Q2M1K9 1284 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 SGSM1Q2NKQ1 1148 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 HLA-BQ31612 363 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 SOWAHCQ53LP3 525 aaPredicted RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 SNX30Q5VWJ9 437 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 PEAR1Q5VY43 1037 aaPredicted RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 CCNI2Q6ZMN8 369 aaPredicted RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 SV2AQ7L0J3 742 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 PROSER1Q86XN7 944 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 DENND1CQ8IV53 801 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CRYBG2Q8N1P7 616 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CYB5D2Q8WUJ1 264 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 ADAMTS14Q8WXS8 1223 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 FOXJ1Q92949 421 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 SIPA1Q96FS4 1042 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CRELD1Q96HD1 420 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 HEXIM2Q96MH2 286 aaKnown RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 GABRG3Q99928 467 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CIPCQ9C0C6 399 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 MTG2Q9H4K7 406 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 FBXO44Q9H4M3 255 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 FAM124BQ9H5Z6 455 aaPredicted RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 APOBEC3GQ9HC16 384 aaKnown RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 ITM2CQ9NQX7 267 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 TM7SF3Q9NS93 570 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 COMMD8Q9NX08 183 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CHMP5Q9NZZ3 219 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 DNMT3LQ9UJW3 386 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 CFAP45Q9UL16 551 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 MAPK8IP1Q9UQF2 711 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 SCML2Q9UQR0 700 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 APOBEC2Q9Y235 224 aaKnown RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 BTBD3Q9Y2F9 522 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 FNDC3AQ9Y2H6 1198 aaKnown RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 FASNP49327 2511 aaKnown RBP6.92□□□□□ -1.3
CD44-221ENST00000526000 OBSL1O75147 1896 aa6.92□□□□□ -1.3
CD44-221ENST00000526000 FRYQ5TBA9 3013 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 GOLGA4Q13439 2230 aaKnown RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 URB1O60287 2271 aaKnown RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 A0A1B0GTW7 788 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 FAM92AA1XBS5 289 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 TRABD2BA6NFA1 517 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 FAM47DPA6NHR8 397 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 METTL12A8MUP2 240 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 BCAT2O15382 392 aaPredicted RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 STAU1O95793 577 aaKnown RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 EPHX1P07099 455 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 TRIM49P0CI25 452 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 TRIM49CP0CI26 452 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 RALAP11233 206 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 ACADMP11310 421 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 P4HA1P13674 534 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 PRKCHP24723 683 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 CORO1AP31146 461 aaKnown RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 HOXD12P35452 270 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 PIK3CAP42336 1068 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 MATKP42679 507 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 ME1P48163 572 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 GCLMP48507 274 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 TUBP50607 506 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 MFAP3P55082 362 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 ARID5AQ03989 594 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 GOLGA8FQ08AF8 430 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 GOLGA8DPQ0D2H9 430 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 ZNF234Q14588 700 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 BMT2Q1RMZ1 405 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 KIF19Q2TAC6 998 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 KMT5BQ4FZB7 885 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 Q6ZNB5 142 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 CLEC20AQ6ZU45 233 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 RABEPKQ7Z6M1 372 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 KIAA1958Q8N8K9 716 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 GANCQ8TET4 914 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 DDI1Q8WTU0 396 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 PRCCQ92733 491 aaPredicted RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 EEF2KMTQ96G04 330 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 DCBLD2Q96PD2 775 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 HNRNPABQ99729 332 aaKnown RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 ARID3AQ99856 593 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms