RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 HCFC1R1Q9NWW0 138 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 FNIP2Q9P278 1114 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 HESX1Q9UBX0 185 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 STK39Q9UEW8 545 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 POLIQ9UNA4 740 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 MUC3AQ02505 3323 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 NOTCH4Q99466 2003 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 WDR27A2RRH5 827 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 M0QYV0 167 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 GABRDO14764 452 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 TRAPPC3O43617 180 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 HUS1O60921 280 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 SASH3O75995 380 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 MICAL2O94851 1124 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 TJP3O95049 919 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 SEC24AO95486 1093 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 GAS8O95995 478 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 C8AP07357 584 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 GLI1P08151 1106 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 PYGMP11217 842 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 HSPA9P38646 679 aaKnown RBP7.39□□□□□ -1.23
VPS11-201ENST00000524454 MTHFRP42898 656 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 LHX1P48742 406 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 ZNF143P52747 638 aaPredicted RBP7.39□□□□□ -1.23
VPS11-201ENST00000524454 SLC8A3P57103 927 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 LILRA4P59901 499 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 ROR1Q01973 937 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 GUCY2DQ02846 1103 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 CREMQ03060 361 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 BST2Q10589 180 aaKnown RBP7.39□□□□□ -1.23
VPS11-201ENST00000524454 SOWAHAQ2M3V2 549 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 CTXN3Q4LDR2 81 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 HSP90B2PQ58FF3 399 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 ATAT1Q5SQI0 421 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 DUPD1Q68J44 220 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 DESI1Q6ICB0 168 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 DENND1BQ6P3S1 775 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 LRIG3Q6UXM1 1119 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 DSTYKQ6XUX3 929 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 XYLT1Q86Y38 959 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 DNAAF5Q86Y56 855 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 PSTKQ8IV42 348 aaKnown RBP7.39□□□□□ -1.23
VPS11-201ENST00000524454 PASD1Q8IV76 773 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 PRELID2Q8N945 189 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 ANKRD52Q8NB46 1076 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 BBOF1Q8ND07 529 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 SLC7A14Q8TBB6 771 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 FAM71BQ8TC56 605 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 TEKT4Q8WW24 435 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 SMG7Q92540 1137 aaKnown RBP7.39□□□□□ -1.23
VPS11-201ENST00000524454 PGLYRP2Q96PD5 576 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 TMEM209Q96SK2 561 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 SYNCQ9H7C4 482 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 PIDD1Q9HB75 910 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 EPB41L5Q9HCM4 733 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.39□□□□□ -1.236e-6■■■■■ 48.1
VPS11-201ENST00000524454 ASNSD1Q9NWL6 643 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 MTRRQ9UBK8 725 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 FBXW11Q9UKB1 542 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 TSPAN16Q9UKR8 245 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 DSEQ9UL01 958 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 SNX9Q9Y5X1 595 aa7.39□□□□□ -1.23
VPS11-201ENST00000524454 CLUHO75153 1309 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 A6NNZ2 444 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 PI4K2BG5E9Z4 385 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 DCXO43602 365 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 OPA1O60313 960 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 SOAT2O75908 522 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 RNF8O76064 485 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 SEC31AO94979 1220 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 ECEL1O95672 775 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 CYP11A1P05108 521 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 CPB1P15086 417 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 GBP2P32456 591 aaPredicted RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 COILP38432 576 aaPredicted RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 PTPN9P43378 593 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 PLA2G4AP47712 749 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 MARCKSL1P49006 195 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 AIF1P55008 147 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 EIF3BP55884 814 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 PSMC1P62191 440 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 SLC25A11Q02978 314 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 RAB33AQ14088 237 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 SIX1Q15475 284 aaPredicted RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 TUBB8Q3ZCM7 444 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 TFDP3Q5H9I0 405 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 PPM1LQ5SGD2 360 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 CFAP58Q5T655 872 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 CCDC137Q6PK04 289 aaKnown RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 CCDC149Q6ZUS6 474 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 ANKS3Q6ZW76 656 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 GET4Q7L5D6 327 aaPredicted RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 SLC26A9Q7LBE3 791 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 GRASPQ7Z6J2 395 aaPredicted RBP7.38□□□□□ -1.23
VPS11-201ENST00000524454 JAMLQ86YT9 394 aa7.38□□□□□ -1.23
VPS11-201ENST00000524454 ADGRF2Q8IZF7 708 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms