RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FOXI1Q12951 378 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 MTAPQ13126 283 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 FHL3Q13643 280 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 CYP1B1Q16678 543 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 TBRG1Q3YBR2 411 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 TSTD2Q5T7W7 516 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 KIRREL2Q6UWL6 708 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 NAPRTQ6XQN6 538 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 RRAGAQ7L523 313 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 RASAL3Q86YV0 1011 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 FTSJ3Q8IY81 847 aaKnown RBP4.46□□□□□ -1.7
SKP1-212ENST00000523966 C12orf76Q8N812 135 aaPredicted RBP4.46□□□□□ -1.7
SKP1-212ENST00000523966 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.46□□□□□ -1.7
SKP1-212ENST00000523966 STT3BQ8TCJ2 826 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 AFG1LQ8WV93 481 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 PDLIM2Q96JY6 352 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 NAP1L4Q99733 375 aaKnown RBP4.46□□□□□ -1.7
SKP1-212ENST00000523966 FSD1LQ9BXM9 530 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.46□□□□□ -1.7
SKP1-212ENST00000523966 FSCN3Q9NQT6 498 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 NDUFAF4Q9P032 175 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 SLC17A6Q9P2U8 582 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 VPS4AQ9UN37 437 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 CNTN6Q9UQ52 1028 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 FER1L4A9Z1Z3 1794 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3DA0A087WVF3 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3IA0A087WXS9 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3EA0A087X179 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3KA0A087X1G2 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 GRID2IPA4D2P6 1211 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3BA6NDS4 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3FA6NER0 549 aaPredicted RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 KIF28PB7ZC32 967 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3LB9A6J9 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 H0YIZ8 118 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 CA12O43570 354 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 EXOC3O60645 756 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 RPP40O75818 363 aaKnown RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 KRT38O76015 456 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 PDE8BO95263 885 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3HP0C7X1 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TMIGD3P0DMS9 266 aaPredicted RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 JUPP14923 745 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TNFRSF1AP19438 455 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 MCM5P33992 734 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 THBS4P35443 961 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 DIO1P49895 249 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 COPB1P53618 953 aaKnown RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 SOX10P56693 466 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 SF3A3Q12874 501 aaKnown RBP eCLIP4.45□□□□□ -1.7
SKP1-212ENST00000523966 AASDHQ4L235 1098 aaPredicted RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3GQ6DHY5 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3CQ6IPX1 549 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 GRHL2Q6ISB3 625 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 MSANTD2Q6P1R3 559 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 CEP85Q6P2H3 762 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 SERPINA13PQ6UXR4 307 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 PIK3AP1Q6ZUJ8 805 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 MOGAT3Q86VF5 341 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 C2CD5Q86YS7 1000 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 C16orf71Q8IYS4 520 aaPredicted RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 TBC1D3Q8IZP1 549 aaPredicted RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 SCAMP5Q8TAC9 235 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 SLC22A17Q8WUG5 538 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 SDCCAG3Q96C92 435 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 CTHRC1Q96CG8 243 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 DAZAP1Q96EP5 407 aaKnown RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 WDYHV1Q96HA8 205 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 CCDC17Q96LX7 622 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 LENG8Q96PV6 779 aaPredicted RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 CIPCQ9C0C6 399 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 VPS16Q9H269 839 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 CPNE5Q9HCH3 593 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 RXFP3Q9NSD7 469 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 TMLHEQ9NVH6 421 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 FOXJ2Q9P0K8 574 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 SRP68Q9UHB9 627 aaKnown RBP4.45□□□□□ -1.7
SKP1-212ENST00000523966 TLK1Q9UKI8 766 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 PCDHB2Q9Y5E7 798 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 SALL3Q9BXA9 1300 aa4.45□□□□□ -1.7
SKP1-212ENST00000523966 E7EVH7 732 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 H0Y3Z8 333 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 FOXN1O15353 648 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 SUV39H1O43463 412 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 CBFA2T3O75081 653 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 GCATO75600 419 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 HNRNPCP07910 306 aaKnown RBP eCLIP4.44□□□□□ -1.7
SKP1-212ENST00000523966 ALADP13716 330 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
SKP1-212ENST00000523966 DRD4P21917 467 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 MATN1P21941 496 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 SERPINA4P29622 427 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 ADD2P35612 726 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 PCP4P48539 62 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 JAK3P52333 1124 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 RBM5P52756 815 aaKnown RBP eCLIP4.44□□□□□ -1.7
SKP1-212ENST00000523966 HOXA4Q00056 320 aaPredicted RBP4.44□□□□□ -1.7
SKP1-212ENST00000523966 DEUP1Q05D60 604 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms