RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SH3BP4Q9P0V3 963 aa5.37□□□□□ -1.55
PCM1-219ENST00000523540 PNMA6EA0A0J9YXQ4 647 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 TCRBV5S1A1TA0A578 114 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 H7C1Q1 480 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 SYT5O00445 386 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 EXOC3O60645 756 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 USP1O94782 785 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 TNFRSF6BO95407 300 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 MBPP02686 304 aaPredicted RBP5.36□□□□□ -1.55
PCM1-219ENST00000523540 CSTBP04080 98 aaKnown RBP5.36□□□□□ -1.55
PCM1-219ENST00000523540 DRD1P21728 446 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 SERPINF1P36955 418 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 RENBPP51606 427 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 GPC5P78333 572 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 CFHR3Q02985 330 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 TFF2Q03403 129 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 TRIM14Q14142 442 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 GRM4Q14833 912 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 ELF2Q15723 593 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 COLEC12Q5KU26 742 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 SUMO4Q6EEV6 95 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 MSANTD2Q6P1R3 559 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 CCDC174Q6PII3 467 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 C12orf76Q8N812 135 aaPredicted RBP5.36□□□□□ -1.55
PCM1-219ENST00000523540 DAZAP1Q96EP5 407 aaKnown RBP5.36□□□□□ -1.55
PCM1-219ENST00000523540 RMDN3Q96TC7 470 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 TP63Q9H3D4 680 aaPredicted RBP5.36□□□□□ -1.55
PCM1-219ENST00000523540 VPS45Q9NRW7 570 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 PTGFRNQ9P2B2 879 aa5.36□□□□□ -1.55
PCM1-219ENST00000523540 H3BNC9 293 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 IFRD1O00458 451 aaPredicted RBP5.35□□□□□ -1.55
PCM1-219ENST00000523540 CTIFO43310 598 aaKnown RBP5.35□□□□□ -1.55
PCM1-219ENST00000523540 PRAMEF2O60811 474 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 MT-CO3P00414 261 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 NHLRC4P0CG21 123 aaPredicted RBP5.35□□□□□ -1.55
PCM1-219ENST00000523540 ATF7P17544 494 aaPredicted RBP5.35□□□□□ -1.55
PCM1-219ENST00000523540 COPB1P53618 953 aaKnown RBP5.35□□□□□ -1.55
PCM1-219ENST00000523540 KRTAP10-9P60411 292 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 SEMA3BQ13214 749 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 BLMHQ13867 455 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 CCDC38Q502W7 563 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 C4orf46Q504U0 113 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 KIAA1614Q5VZ46 1190 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 FCRLBQ6BAA4 426 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 CCDC144NLQ6NUI1 221 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 ERAP2Q6P179 960 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 GLCCI1Q86VQ1 547 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 GATAD2AQ86YP4 633 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 P3H2Q8IVL5 708 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 CACNA2D3Q8IZS8 1091 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 ATG16L2Q8NAA4 619 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 OR1N1Q8NGS0 311 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 HASPINQ8TF76 798 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 OVCA2Q8WZ82 227 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 KATNAL1Q9BW62 490 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 SEMA4CQ9C0C4 833 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 TFCP2L1Q9NZI6 479 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 FZD4Q9ULV1 537 aa5.35□□□□□ -1.55
PCM1-219ENST00000523540 SPATA31A6Q5VVP1 1343 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 GXYLT2A0PJZ3 443 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
PCM1-219ENST00000523540 M0QZQ0 153 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 ACKR2O00590 384 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 DNPH1O43598 174 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 TCEA3O75764 348 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 TMIGD3P0DMS9 266 aaPredicted RBP5.34□□□□□ -1.55
PCM1-219ENST00000523540 KLRK1P26718 216 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 ALDH18A1P54886 795 aaKnown RBP5.34□□□□□ -1.55
PCM1-219ENST00000523540 PROK1P58294 105 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 C21orf58P58505 322 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 TXNL4AP83876 142 aaKnown RBP5.34□□□□□ -1.55
PCM1-219ENST00000523540 CCDC15Q0P6D6 951 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 PROSER3Q2NL68 480 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 LIN54Q6MZP7 749 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 FAM71DQ8N9W8 422 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 MAFAQ8NHW3 353 aaPredicted RBP5.34□□□□□ -1.55
PCM1-219ENST00000523540 RSC1A1Q92681 617 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 PAAF1Q9BRP4 392 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 USP29Q9HBJ7 922 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 DACT1Q9NYF0 836 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 SEMA5BQ9P283 1151 aa5.34□□□□□ -1.55
PCM1-219ENST00000523540 LINC01548A6NM66 108 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 INO80B-WBP1J3KQ70 363 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 TRIM38O00635 465 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 ZNF37AP17032 561 aaPredicted RBP5.33□□□□□ -1.56
PCM1-219ENST00000523540 GALNSP34059 522 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 CHKAP35790 457 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 GSTM5P46439 218 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 FOXO1Q12778 655 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 BFSP2Q13515 415 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 CSHL1Q14406 222 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 GRAMD1BQ3KR37 738 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 TTC30AQ86WT1 665 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 CHSY1Q86X52 802 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 NRSN1Q8IZ57 195 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 SEMA6DQ8NFY4 1073 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 STT3BQ8TCJ2 826 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 ADAMTS18Q8TE60 1221 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 RITA1Q96K30 269 aa5.33□□□□□ -1.56
PCM1-219ENST00000523540 CINPQ9BW66 212 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms