RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 KIF3CO14782 793 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 USP12O75317 370 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZNF143P52747 638 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 SP2Q02086 613 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 MMRN1Q13201 1228 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 CUL3Q13618 768 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 PTPN20Q4JDL3 420 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ANGPTL8Q6UXH0 198 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 KAT2BQ92831 832 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 WNT8BQ93098 351 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TEPSINQ96N21 525 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 FBXO44Q9H4M3 255 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 YWHAQP27348 245 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 AVPR1AP37288 418 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 FOXD4Q12950 439 aaPredicted RBP13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 SLC26A11Q86WA9 606 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 TTC30BQ8N4P2 665 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 ANKRD52Q8NB46 1076 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 PDZD8Q8NEN9 1154 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 HSFY1Q96LI6 401 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 IARS2Q9NSE4 1012 aaKnown RBP13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 IPPQ9Y573 584 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 SMIM35A0A1B0GVV1 85 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 RBAK-RBAKDNI3L0D1 243 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 NOS2P35228 1153 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 BRCC3P46736 316 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 RABGAP1LQ5R372 815 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 ATXN3LQ9H3M9 355 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 TLR8Q9NR97 1041 aaKnown RBP13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 OLA1Q9NTK5 396 aaKnown RBP13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 NSMCE4AQ9NXX6 385 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 ANGPTL2Q9UKU9 493 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 CBX4O00257 560 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 CABYRO75952 493 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 CHRM3P20309 590 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 OXCT1P55809 520 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 PTK6Q13882 451 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 POU6F1Q14863 301 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 TRADDQ15628 312 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 RBBP7Q16576 425 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 PTRHD1Q6GMV3 140 aaKnown RBP13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 CARNMT1Q8N4J0 409 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 KIF2BQ8N4N8 673 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 DDI1Q8WTU0 396 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 SHCBP1LQ9BZQ2 653 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 PDZD7Q9H5P4 517 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 RRN3Q9NYV6 651 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
PCDHGB1-201ENST00000523390 MYH13Q9UKX3 1938 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 SMIM28A0A1B0GU29 152 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 ARIH2O95376 493 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 ASMTLO95671 621 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 TRUB2O95900 331 aaKnown RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 GLRBP48167 497 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 EFTUD2Q15029 972 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 TIGD7Q6NT04 549 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 PPP2R3CQ969Q6 453 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 O00370 1275 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 MAP3K7O43318 606 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 RHOCP08134 193 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 MMP8P22894 467 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 B3GNT5Q9BYG0 378 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 DRC3Q9H069 523 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 NOP53Q9NZM5 478 aaKnown RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 STK25O00506 426 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 LAMB3Q13751 1172 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 ARHGEF7Q14155 803 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZC3H12AQ5D1E8 599 aaKnown RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 SH3D19Q5HYK7 790 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 TTC23LQ6PF05 361 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 STRA8Q7Z7C7 330 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 CCNJLQ8IV13 435 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 PBXIP1Q96AQ6 731 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 CHST12Q9NRB3 414 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 PCDHA2Q9Y5H9 948 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 COL1A2P08123 1366 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 RHOBTB1O94844 696 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 PYGBP11216 843 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 MARC1Q5VT66 337 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 LRRC38Q5VT99 294 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 CPXM1Q96SM3 734 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 NTPCRQ9BSD7 190 aaKnown RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 EIF2AQ9BY44 585 aaKnown RBP13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 L3MBTL1Q9Y468 752 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms