RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 DCAF6Q58WW2 860 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 PNPLA8Q9NP80 782 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 DDX18Q9NVP1 670 aaKnown RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 CLN6Q9NWW5 311 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 GNB5O14775 395 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 SSTR3P32745 418 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 USF2Q15853 346 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 WDR72Q3MJ13 1102 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 SNRNP48Q6IEG0 339 aaKnown RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ACTRT2Q8TDY3 377 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 GANQ9H2C0 597 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 NEUROD4Q9HD90 331 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 HAO1Q9UJM8 370 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 MYH11P35749 1972 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 A0A1W2PQ72 361 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 MSR1P21757 451 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 GTF2H1P32780 548 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 CAPGP40121 348 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 RASA2Q15283 850 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 NAIF1Q69YI7 327 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 TCAIMQ8N3R3 496 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 RP9Q8TA86 221 aaKnown RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 SLC38A2Q96QD8 506 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 VCPKMTQ9H867 229 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 CDC42BPBQ9Y5S2 1711 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 RGS14O43566 566 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 GRB14Q14449 540 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 PEX5LQ8IYB4 626 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 CD248Q9HCU0 757 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 GABBR1Q9UBS5 961 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 MLXQ9UH92 298 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ZNF432O94892 652 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ATP5BP06576 529 aaKnown RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 STIP1P31948 543 aaKnown RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ALDH9A1P49189 494 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 TOMM20Q15388 145 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 MEIOBQ8N635 442 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 LRRC4BQ9NT99 713 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 N6AMT1Q9Y5N5 214 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 PTGES3LE9PB15 166 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 TPBGLP0DKB5 382 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 AVPR1AP37288 418 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 CLVS1Q8IUQ0 354 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ATP6V0D2Q8N8Y2 350 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 SEPT5Q99719 369 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 PIN4Q9Y237 131 aaKnown RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 CYP26A1O43174 497 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 SCTRP47872 440 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 OCLNQ16625 522 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 MIIPQ5JXC2 388 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 MED8Q96G25 268 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 ZC3H10Q96K80 434 aaKnown RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 MAGEB10Q96LZ2 347 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
EXTL3-214ENST00000523271 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
EXTL3-214ENST00000523271 NCF1BA6NI72 391 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 NCF1CA8MVU1 366 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 H7C1W4 665 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 NCF1P14598 390 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 CDK8P49336 464 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 MYBPC2Q14324 1141 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 ATG14Q6ZNE5 492 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 MYDGFQ969H8 173 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 KLHL32Q96NJ5 620 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 GIT1Q9Y2X7 761 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 PREX2Q70Z35 1606 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 POTEMA6NI47 508 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 WRBO00258 174 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 PLA2G6O60733 806 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 STAU1O95793 577 aaKnown RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 ATP5F1P24539 256 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 DCUN1D5Q9BTE7 237 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 RXFP1Q9HBX9 757 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 SLC26A4O43511 780 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 SLC11A2P49281 568 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 ITGA8P53708 1063 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 SWSAP1Q6NVH7 229 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 EAF2Q96CJ1 260 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 JMJD4Q9H9V9 463 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 KIAA1210Q9ULL0 1709 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 CLOCKO15516 846 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 ULK1O75385 1050 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 PREPLQ4J6C6 727 aaPredicted RBP12.72□□□□□ -0.37
EXTL3-214ENST00000523271 KBTBD8Q8NFY9 601 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 BLOC1S5Q8TDH9 187 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 CPA5Q8WXQ8 436 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 SGF29Q96ES7 293 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 TMEM117Q9H0C3 514 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 ZSWIM5Q9P217 1185 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 TTC26A0AVF1 554 aa12.72□□□□□ -0.37
EXTL3-214ENST00000523271 OR14I1A6ND48 311 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms