RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PLD4Q96BZ4 506 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 ZSCAN32Q9NX65 697 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 MARK1Q9P0L2 795 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 WDR35Q9P2L0 1181 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 SFMBT1Q9UHJ3 866 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 PCDHGA2Q9Y5H1 932 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 DMDP11532 3685 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 LGALS16A8MUM7 142 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 E5RJQ4 531 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 K7EQS6 105 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 K7ESF4 209 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 PAPSS1O43252 624 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-221ENST00000522720 KAT7O95251 611 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 APODP05090 189 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 FYNP06241 537 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 HOXA6P31267 233 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 KRT9P35527 623 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 CHKAP35790 457 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 GRIA2P42262 883 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 MESP2Q0VG99 397 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 PDCLQ13371 301 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 TPGS1Q6ZTW0 290 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 APTXQ7Z2E3 356 aaKnown RBP17.12■□□□□ 0.33
PABPC1-221ENST00000522720 PHTF2Q8N3S3 785 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 NAT16Q8N8M0 369 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 ATRIPQ8WXE1 791 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 NKD2Q969F2 451 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-221ENST00000522720 FUCA2Q9BTY2 467 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 BBS2Q9BXC9 721 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 GANQ9H2C0 597 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 ARHGEF4Q9NR80 690 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 DEC1Q9P2X7 70 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 AGO1Q9UL18 857 aaKnown RBP17.12■□□□□ 0.33
PABPC1-221ENST00000522720 SIK3Q9Y2K2 1263 aa17.12■□□□□ 0.33
PABPC1-221ENST00000522720 NEDD8-MDP1E9PL57 170 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 CACNG3O60359 315 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 TULP3O75386 442 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 TYRP14679 529 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 CYP11B1P15538 503 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 HARS2P49590 506 aaKnown RBP17.11■□□□□ 0.33
PABPC1-221ENST00000522720 KLK7P49862 253 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 SYCP1Q15431 976 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 PREPLQ4J6C6 727 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-221ENST00000522720 BEND5Q7L4P6 421 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 DENND1CQ8IV53 801 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 PASD1Q8IV76 773 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
PABPC1-221ENST00000522720 RPLP0P6Q8NHW5 317 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 FAM207AQ9NSI2 230 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-221ENST00000522720 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 KIAA1549LQ6ZVL6 1849 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 WDR87Q6ZQQ6 2873 aa17.11■□□□□ 0.33
PABPC1-221ENST00000522720 EP300Q09472 2414 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-221ENST00000522720 USP34Q70CQ2 3546 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 F8VZ95 297 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 LILRB5O75023 590 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 NCAM1P13591 858 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 TNFRSF4P43489 277 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 ZNF165P49910 485 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
PABPC1-221ENST00000522720 MRPS21P82921 87 aaKnown RBP17.1■□□□□ 0.33
PABPC1-221ENST00000522720 UBXN1Q04323 297 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 SYT13Q7L8C5 426 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 ASCL5Q7RTU5 278 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 SFTPA1Q8IWL2 248 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 CPXM2Q8N436 756 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 FAM149B1Q96BN6 582 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 PPP1R13BQ96KQ4 1090 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 NOX5Q96PH1 765 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 XPO6Q96QU8 1125 aaKnown RBP17.1■□□□□ 0.33
PABPC1-221ENST00000522720 ERGIC2Q96RQ1 377 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 CPXM1Q96SM3 734 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 TRIM62Q9BVG3 475 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 CEP83Q9Y592 693 aa17.1■□□□□ 0.33
PABPC1-221ENST00000522720 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 PRR23AA6NEV1 266 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 EPHB6O15197 1021 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 MSI1O43347 362 aaKnown RBP17.09■□□□□ 0.33
PABPC1-221ENST00000522720 GFRA3O60609 400 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-221ENST00000522720 IGLV3-27P01718 113 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 YWHAZP63104 245 aaKnown RBP17.09■□□□□ 0.33
PABPC1-221ENST00000522720 KDSRQ06136 332 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 C2orf27AQ580R0 203 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 C1orf131Q8NDD1 294 aaKnown RBP17.09■□□□□ 0.33
PABPC1-221ENST00000522720 DDX1Q92499 740 aaKnown RBP17.09■□□□□ 0.33
PABPC1-221ENST00000522720 ACDQ96AP0 544 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 P2RY11Q96G91 374 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
PABPC1-221ENST00000522720 TJP2Q9UDY2 1190 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 STOML2Q9UJZ1 356 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 SLC8A2Q9UPR5 921 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 NAALADL1Q9UQQ1 740 aa17.09■□□□□ 0.33
PABPC1-221ENST00000522720 OTOGLQ3ZCN5 2332 aa17.08■□□□□ 0.33
PABPC1-221ENST00000522720 SYCE3A1L190 88 aa17.08■□□□□ 0.32
PABPC1-221ENST00000522720 TBC1D3BA6NDS4 549 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms