RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ACOX2Q99424 681 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 MARCH2Q9P0N8 246 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 NUP205Q92621 2012 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 RNF225M0QZC1 329 aaPredicted RBP21.7■■□□□ 1.06
SDCBP-209ENST00000522243 O00370 1275 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 FOXD2O60548 495 aaPredicted RBP21.7■■□□□ 1.06
SDCBP-209ENST00000522243 CALCAP01258 141 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 CORO1AP31146 461 aaKnown RBP21.7■■□□□ 1.06
SDCBP-209ENST00000522243 DGKGP49619 791 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 PM20D1Q6GTS8 502 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 RRAGAQ7L523 313 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 BHLHA9Q7RTU4 235 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 DENND1CQ8IV53 801 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 OLIG1Q8TAK6 271 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 LMO3Q8TAP4 145 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 STRIP2Q9ULQ0 834 aa21.7■■□□□ 1.06
SDCBP-209ENST00000522243 BCLAF3A2AJT9 711 aaKnown RBP21.69■■□□□ 1.06
SDCBP-209ENST00000522243 PIK3R2O00459 728 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 CAVIN2O95810 425 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 CISD3P0C7P0 127 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 LCP1P13796 627 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 HOXB2P14652 356 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 NTSR1P30989 418 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 RGS7P49802 495 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 PAK1Q13153 545 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 TRMT11Q7Z4G4 463 aaKnown RBP21.69■■□□□ 1.06
SDCBP-209ENST00000522243 ARHGEF19Q8IW93 802 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 KCNV2Q8TDN2 545 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 EDEM1Q92611 657 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 IPO9Q96P70 1041 aaKnown RBP21.69■■□□□ 1.06
SDCBP-209ENST00000522243 ZSWIM1Q9BR11 485 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 SRRTQ9BXP5 876 aaKnown RBP21.69■■□□□ 1.06
SDCBP-209ENST00000522243 VPS45Q9NRW7 570 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 AGO1Q9UL18 857 aaKnown RBP21.69■■□□□ 1.06
SDCBP-209ENST00000522243 ZNF510Q9Y2H8 683 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 STARD13Q9Y3M8 1113 aa21.69■■□□□ 1.06
SDCBP-209ENST00000522243 PMM2O15305 246 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 KCNA4P22459 653 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 BRD2P25440 801 aaKnown RBP21.68■■□□□ 1.06
SDCBP-209ENST00000522243 P2RY2P41231 377 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 DHPSP49366 369 aaPredicted RBP21.68■■□□□ 1.06
SDCBP-209ENST00000522243 CETN1Q12798 172 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 KCNH2Q12809 1159 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 PKDCCQ504Y2 493 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 C11orf74Q86VG3 221 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 CHPFQ8IZ52 775 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 SIX6OS1Q8N1H7 587 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 DCLK3Q9C098 648 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 SFMBT1Q9UHJ3 866 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 KIAA1257Q9ULG3 409 aa21.68■■□□□ 1.06
SDCBP-209ENST00000522243 WDR87Q6ZQQ6 2873 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 YJEFN3A6XGL0 299 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 E7ENQ6 273 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 MAP3K13O43283 966 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 PAEPP09466 180 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 SETSIPP0DME0 302 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 GABRG2P18507 467 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 CHKAP35790 457 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 CAMK4Q16566 473 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 FYB2Q5VWT5 728 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 BSPRYQ5W0U4 402 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 IL31Q6EBC2 164 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 FOXR2Q6PJQ5 311 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 LCLAT1Q6UWP7 414 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 ARMCX6Q7L4S7 300 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 FMNL3Q8IVF7 1028 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 TRIM59Q8IWR1 403 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 RBBP8NLQ8NC74 664 aaPredicted RBP21.67■■□□□ 1.06
SDCBP-209ENST00000522243 EHBP1Q8NDI1 1231 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 KCTD13Q8WZ19 329 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 SPACA7Q96KW9 195 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 MBD1Q9UIS9 605 aaPredicted RBP21.67■■□□□ 1.06
SDCBP-209ENST00000522243 RAD54BQ9Y620 910 aa21.67■■□□□ 1.06
SDCBP-209ENST00000522243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 M0QYV0 167 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 P4HA2O15460 535 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 GABBR2O75899 941 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 GNA14O95837 355 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 MAP7D1Q3KQU3 841 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 PPM1JQ5JR12 505 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 STPG1Q5TH74 334 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 SDE2Q6IQ49 451 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 KIAA1211LQ6NV74 962 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 PMF1Q6P1K2 205 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 CYP2U1Q7Z449 544 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 CREBRFQ8IUR6 639 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 TMEFF1Q8IYR6 380 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 RNF139Q8WU17 664 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 PLD4Q96BZ4 506 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 CACNA2D2Q9NY47 1150 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 FBXO10Q9UK96 956 aa21.66■■□□□ 1.06
SDCBP-209ENST00000522243 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.66■■□□□ 1.06
SDCBP-209ENST00000522243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.66■■□□□ 1.06
SDCBP-209ENST00000522243 CEP192Q8TEP8 1941 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 PLXND1Q9Y4D7 1925 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 A0A1W2PQF6 199 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 PATE3B3GLJ2 98 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 WASH3PC4AMC7 463 aa21.65■■□□□ 1.06
SDCBP-209ENST00000522243 PENKP01210 267 aaPredicted RBP21.65■■□□□ 1.06
SDCBP-209ENST00000522243 AFPP02771 609 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms