RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 EEF1GP26641 437 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 CNR2P34972 360 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 KIR2DL1P43626 348 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 TRIP4Q15650 581 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 MEA1Q16626 185 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 TCP11X2Q5H9J9 407 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 DENND1CQ8IV53 801 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 FMNL3Q8IVF7 1028 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 SCUBE3Q8IX30 993 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 CCDC33Q8N5R6 958 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 MIS12Q9H081 205 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 DNAJC17Q9NVM6 304 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 CYTH4Q9UIA0 394 aa18.7■□□□□ 0.58
TRAPPC9-211ENST00000521700 GVINP1Q7Z2Y8 2422 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 FOXN3O00409 490 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 FBXO21O94952 628 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 TIE1P35590 1138 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 SIM2Q14190 667 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 LPAL2Q16609 132 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 SASS6Q6UVJ0 657 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 TERB1Q8NA31 727 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 STK32AQ8WU08 396 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 PLD4Q96BZ4 506 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 XPO6Q96QU8 1125 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 HINFPQ9BQA5 517 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 SLC4A5Q9BY07 1137 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 ZDHHC4Q9NPG8 344 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 ST7Q9NRC1 585 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 PLK2Q9NYY3 685 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 MMP17Q9ULZ9 603 aa18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 HBS1LQ9Y450 684 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-211ENST00000521700 MBD3O95983 291 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 LTFP02788 710 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 CISD3P0C7P0 127 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 CHKAP35790 457 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 PREPLQ4J6C6 727 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 CDKAL1Q5VV42 579 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 SMYD5Q6GMV2 418 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 GRAMD4Q6IC98 578 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 MSANTD2Q6P1R3 559 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 PRR23BQ6ZRT6 265 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 C11orf57Q6ZUT1 292 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 ALLCQ8N6M5 410 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 IL17RCQ8NAC3 791 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 BHMTQ93088 406 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 ANO10Q9NW15 660 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 TAB2Q9NYJ8 693 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 NCDNQ9UBB6 729 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 FBXO10Q9UK96 956 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 HCN2Q9UL51 889 aa18.68■□□□□ 0.58
TRAPPC9-211ENST00000521700 MYO18AQ92614 2054 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 SGK1O00141 431 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 PES1O00541 588 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 AXIN1O15169 862 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 MSI1O43347 362 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 KLF8O95600 359 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 APBB3O95704 486 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 PENKP01210 267 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 FYNP06241 537 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 PNMA6AP0CW24 399 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 CLCN1P35523 988 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 ACADSBP45954 432 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 CRY1Q16526 586 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 C10orf76Q5T2E6 689 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 CCDC183Q5T5S1 534 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 FYB2Q5VWT5 728 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 TMEM92Q6UXU6 159 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 TOGARAM2Q6ZUX3 1019 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 TMEM110Q86TL2 294 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 FAM217AQ8IXS0 508 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 CPXM2Q8N436 756 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 WDTC1Q8N5D0 677 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 TXNDC5Q8NBS9 432 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 FANCLQ9NW38 375 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 EBF1Q9UH73 591 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 RAB23Q9ULC3 237 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 STARD13Q9Y3M8 1113 aa18.67■□□□□ 0.58
TRAPPC9-211ENST00000521700 EML5Q05BV3 1969 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 PAPSS1O43252 624 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 HNRNPLP14866 589 aaKnown RBP eCLIP18.66■□□□□ 0.584e-7■■■■■ 26.9
TRAPPC9-211ENST00000521700 HARS2P49590 506 aaKnown RBP18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 PTK2Q05397 1052 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 HSF5Q4G112 596 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 KLHDC7AQ5VTJ3 777 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 NUDT18Q6ZVK8 323 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 CEP68Q76N32 757 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 FAM71AQ8IYT1 594 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 TSTD1Q8NFU3 115 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 KCNV2Q8TDN2 545 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 GAB3Q8WWW8 586 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 VPS16Q9H269 839 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 PCDHGC3Q9UN70 934 aa18.66■□□□□ 0.58
TRAPPC9-211ENST00000521700 ZNF292O60281 2723 aa18.65■□□□□ 0.58
TRAPPC9-211ENST00000521700 PRRT4C9JH25 899 aa18.65■□□□□ 0.58
TRAPPC9-211ENST00000521700 E5RJQ4 531 aa18.65■□□□□ 0.58
TRAPPC9-211ENST00000521700 ADAM23O75077 832 aa18.65■□□□□ 0.58
TRAPPC9-211ENST00000521700 RPP40O75818 363 aaKnown RBP18.65■□□□□ 0.58
TRAPPC9-211ENST00000521700 NCAM1P13591 858 aa18.65■□□□□ 0.58
TRAPPC9-211ENST00000521700 DGKGP49619 791 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms