RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 NME3Q13232 169 aa19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 HIF1AQ16665 826 aa19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 PYROXD2Q8N2H3 581 aa19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 TMEM209Q96SK2 561 aa19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 SEZ6LQ9BYH1 1024 aa19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 DMAP1Q9NPF5 467 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 COX16Q9P0S2 106 aa19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 USP3Q9Y6I4 520 aa19.18■□□□□ 0.66
TRAPPC9-210ENST00000521667 GOLGA8MH3BSY2 632 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 LTFP02788 710 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 IVLP07476 585 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 GOT1P17174 413 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 RBL1P28749 1068 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 NR2C2P49116 596 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 CDK7P50613 346 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 ARL4CP56559 192 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 BASP1P80723 227 aaKnown RBP19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 GBE1Q04446 702 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 STAT4Q14765 748 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 ZSCAN26Q16670 478 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 LRRTM3Q86VH5 581 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 CDKL3Q8IVW4 592 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 TAB3Q8N5C8 712 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 SLC7A14Q8TBB6 771 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 CCDC77Q9BR77 488 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 CNOT10Q9H9A5 744 aaKnown RBP19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 PIGVQ9NUD9 493 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 PAK5Q9P286 719 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 KANSL3Q9P2N6 904 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 MAP3K6O95382 1288 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 YWHAHQ04917 246 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 PDIA2Q13087 525 aaKnown RBP19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 XRCC4Q13426 336 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 FASTKD3Q14CZ7 662 aaKnown RBP19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 BHLHA9Q7RTU4 235 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 COLGALT2Q8IYK4 626 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 ZBED8Q8IZ13 594 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 IRGQQ8WZA9 623 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 SLC9A7Q96T83 725 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 PRDM16Q9HAZ2 1276 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 TBC1D13Q9NVG8 400 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 TMEM161AQ9NX61 479 aa19.17■□□□□ 0.66
TRAPPC9-210ENST00000521667 A0A087WUV0 522 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 TMEM189-UBE2V1I3L0A0 370 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 TMEM63AO94886 807 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 COL6A1P12109 1028 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 NCAM1P13591 858 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 AMPD1P23109 780 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 LSP1P33241 339 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 AIF1P55008 147 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 BFSP2Q13515 415 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 EFHC2Q5JST6 749 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 NCBP2-AS2Q69YL0 99 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 CTU1Q7Z7A3 348 aaKnown RBP19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 FAM126BQ8IXS8 530 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 DEFB118Q96PH6 123 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 PNPLA8Q9NP80 782 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 RRN3Q9NYV6 651 aa19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 XPO7Q9UIA9 1087 aaKnown RBP19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.16■□□□□ 0.66
TRAPPC9-210ENST00000521667 TCRBV7S3A2A0A539 114 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 H3BRJ5 948 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 DNM1LO00429 736 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 GAD2Q05329 585 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 RNASELQ05823 741 aaKnown RBP19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 SLC10A2Q12908 348 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 PM20D1Q6GTS8 502 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 SCML4Q8N228 414 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 RNF139Q8WU17 664 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 PGAP3Q96FM1 320 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 TMPRSS4Q9NRS4 437 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 NBNO60934 754 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 ATP5DP30049 168 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 MMP13P45452 471 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 OR1G1P47890 313 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 SLC45A4Q5BKX6 768 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 HP1BP3Q5SSJ5 553 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 ADAM32Q8TC27 787 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 NTAN1Q96AB6 310 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 FAM193BQ96PV7 902 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 WDR6Q9NNW5 1121 aaKnown RBP19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 ARHGEF4Q9NR80 690 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 ETNK2Q9NVF9 386 aa19.15■□□□□ 0.66
TRAPPC9-210ENST00000521667 E7ESA3 106 aa19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 ADRA1BP35368 520 aa19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 FNBP1LQ5T0N5 605 aa19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 C4orf50Q6ZRC1 276 aa19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 TAOK1Q7L7X3 1001 aa19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 SPATA2LQ8IUW3 424 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 CCDC13Q8IYE1 715 aa19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 QKIQ96PU8 341 aaKnown RBP eCLIP19.14■□□□□ 0.654e-7■■□□□ 13.8
TRAPPC9-210ENST00000521667 ELAC1Q9H777 363 aaKnown RBP19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 PAK6Q9NQU5 681 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 DTLQ9NZJ0 730 aa19.14■□□□□ 0.65
TRAPPC9-210ENST00000521667 CHADO15335 359 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 CDH16O75309 829 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 CCL5P13501 91 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 SCAPQ12770 1279 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 KCNJ11Q14654 390 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 GPNMBQ14956 572 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms