RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 PDLIM2Q96JY6 352 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 PRRX2Q99811 253 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 PAAF1Q9BRP4 392 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 TTPALQ9BTX7 342 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 FOXJ2Q9P0K8 574 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 KIF17Q9P2E2 1029 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 MGAT4CQ9UBM8 478 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 NFU1Q9UMS0 254 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 LAS1LQ9Y4W2 734 aaKnown RBP7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM90A18PA6NE21 464 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM90A16PA6NEW6 464 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 TMEM191CA6NGB0 347 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM90A9PA6NNJ1 464 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM90A5PA8MXJ8 464 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 QSOX1O00391 747 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 CTIFO43310 598 aaKnown RBP7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 TMPRSS11DO60235 418 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 RPP40O75818 363 aaKnown RBP7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 CER1O95813 267 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM163BP0C2L3 166 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 ELFN1P0C7U0 828 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM90A15PP0C7V4 464 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM90A14PP0C7W9 464 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 EBLN1P0CF75 366 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 ADRA1DP25100 572 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 DEUP1Q05D60 604 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 DPTQ07507 201 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 SEMA3BQ13214 749 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 ZNF169Q14929 603 aaPredicted RBP7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 HECTD2Q5U5R9 776 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 Q6ZPA2 131 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 TRABD2AQ86V40 505 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 MOGAT3Q86VF5 341 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 P3H2Q8IVL5 708 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 TMTC2Q8N394 836 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 ABHD11Q8NFV4 315 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 LENG8Q96PV6 779 aaPredicted RBP7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 EIF3CQ99613 913 aaKnown RBP7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 FSD1LQ9BXM9 530 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 ASAP1Q9ULH1 1129 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 DAPP1Q9UN19 280 aa7.54□□□□□ -1.2
NUDCD1-204ENST00000521439 EFCAB8A8MWE9 144 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 H0YIZ8 118 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 NPSP0C0P6 89 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 MYCLP12524 364 aaPredicted RBP7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 INHBCP55103 352 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 EEFSECP57772 596 aaKnown RBP7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 BFSP2Q13515 415 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 L1TD1Q5T7N2 865 aaKnown RBP7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 DENND2CQ68D51 928 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 PNPLA1Q8N8W4 532 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 SPPL3Q8TCT6 385 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 SLC22A17Q8WUG5 538 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 TRIM44Q96DX7 344 aaPredicted RBP7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 TRAPPC9Q96Q05 1148 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 VPS16Q9H269 839 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 TOR3AQ9H497 397 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 SNX15Q9NRS6 342 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 ADAMTS5Q9UNA0 930 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 C19orf53Q9UNZ5 99 aaPredicted RBP7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 CNTN6Q9UQ52 1028 aa7.53□□□□□ -1.2
NUDCD1-204ENST00000521439 WDR33Q9C0J8 1336 aaKnown RBP7.52□□□□□ -1.2
NUDCD1-204ENST00000521439 GXYLT2A0PJZ3 443 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 GCOM1H8Y6P7 765 aaPredicted RBP7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 CA12O43570 354 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 PPP6R2O75170 966 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 ADD2P35612 726 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 DIO1P49895 249 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 MMP14P50281 582 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 CCT8P50990 548 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 DNASE1L3Q13609 305 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 AARS2Q5JTZ9 985 aaKnown RBP7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 LAIR1Q6GTX8 287 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 OR6Y1Q8NGX8 325 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 MCRS1Q96EZ8 462 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 ZSCAN31Q96LW9 406 aaPredicted RBP7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 THAP7Q9BT49 309 aaPredicted RBP7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 BRD8Q9H0E9 1235 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 TAF1DQ9H5J8 278 aaPredicted RBP7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 ELAC1Q9H777 363 aaKnown RBP7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 SEPSECSQ9HD40 501 aaKnown RBP7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 SAGE1Q9NXZ1 904 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 GTF2A1LQ9UNN4 478 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 ST3GAL5Q9UNP4 418 aa7.52□□□□□ -1.21
NUDCD1-204ENST00000521439 KIF28PB7ZC32 967 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 ZNF37AP17032 561 aaPredicted RBP7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 KRT4P19013 534 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 MMP8P22894 467 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 ITPKBP27987 946 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 RARRES1P49788 294 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 CDK7P50613 346 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 PSG6Q00889 435 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 ADCK5Q3MIX3 580 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 PCID2Q5JVF3 399 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 TTC22Q5TAA0 569 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 RRAGAQ7L523 313 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 KRT27Q7Z3Y8 459 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 LDLRAD3Q86YD5 345 aa7.51□□□□□ -1.21
NUDCD1-204ENST00000521439 SFTPA1Q8IWL2 248 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms