RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 KRT78Q8N1N4 520 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 SLC15A4Q8N697 577 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 TMEM171Q8WVE6 324 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 GBA2Q9HCG7 927 aaPredicted RBP4.99□□□□□ -1.61
CLK4-207ENST00000520909 NSD3Q9BZ95 1437 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 KNDC1Q76NI1 1749 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 CGNL1Q0VF96 1302 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 PPIP5K1Q6PFW1 1433 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 IL33O95760 270 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 TOMM40O96008 361 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 ATF3P18847 181 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 TNNT2P45379 298 aaPredicted RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 CDKN1CP49918 316 aaPredicted RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 CCNIQ14094 377 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 CCDC184Q52MB2 194 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 LMBRD2Q68DH5 695 aaPredicted RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 ZNF549Q6P9A3 640 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 VSTM1Q6UX27 236 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 DCDC5Q6ZRR9 648 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 CELF5Q8N6W0 485 aaKnown RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 DNAJC5GQ8N7S2 189 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 RBMXL3Q8N7X1 1067 aaKnown RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 NGDNQ8NEJ9 315 aaKnown RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 MPLKIPQ8TAP9 179 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 BPIFB1Q8TDL5 484 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 MVB12AQ96EY5 273 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 HS6ST2Q96MM7 605 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 CTAGE1Q96RT6 745 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 SNX15Q9NRS6 342 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 LPAR3Q9UBY5 353 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 USP22Q9UPT9 525 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 ACEP12821 1306 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 ZNF335Q9H4Z2 1342 aaPredicted RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 A0A1W2PP64 1363 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 TMEM94Q12767 1356 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 PARD3Q8TEW0 1356 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 NPC1L1Q9UHC9 1359 aa4.98□□□□□ -1.61
CLK4-207ENST00000520909 XRN1Q8IZH2 1706 aaKnown RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.98□□□□□ -1.61
CLK4-207ENST00000520909 M0R3H8 397 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 APEHP13798 732 aaKnown RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 PPP2R1AP30153 589 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 PRKAR1BP31321 381 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 THBS4P35443 961 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 CFHR1Q03591 330 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 SEC23BQ15437 767 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 PLA1AQ53H76 456 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 CERCAMQ5T4B2 595 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 SPARTQ8N0X7 666 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 GTPBP4Q9BZE4 634 aaKnown RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 ARMT1Q9H993 441 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 MLXIPQ9HAP2 919 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 PIH1D1Q9NWS0 290 aaKnown RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 MGAT4CQ9UBM8 478 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 DRG1Q9Y295 367 aaKnown RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 CHD2O14647 1828 aaKnown RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 ADGRL3Q9HAR2 1447 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 MYOM1P52179 1685 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 ATP7BP35670 1465 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 EME2A4GXA9 379 aaPredicted RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 GTPBP1O00178 669 aaKnown RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 FYB1O15117 783 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 TGFB3P10600 412 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 DIO1P49895 249 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 HYAL1Q12794 435 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 SLC9C1Q4G0N8 1177 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 UBE2Q1Q7Z7E8 422 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 ADHFE1Q8IWW8 467 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 FAM9BQ8IZU0 186 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 MAFAQ8NHW3 353 aaPredicted RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 GAR1Q9NY12 217 aaKnown RBP4.97□□□□□ -1.61
CLK4-207ENST00000520909 STXBP5LQ9Y2K9 1186 aa4.97□□□□□ -1.61
CLK4-207ENST00000520909 TTC21BQ7Z4L5 1316 aa4.96□□□□□ -1.61
CLK4-207ENST00000520909 CPSF1Q10570 1443 aaKnown RBP4.96□□□□□ -1.62
CLK4-207ENST00000520909 ANKARQ7Z5J8 1434 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 NKTRP30414 1462 aaKnown RBP4.96□□□□□ -1.62
CLK4-207ENST00000520909 CD163L1Q9NR16 1453 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 STRCQ7RTU9 1775 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 CREB1P16220 341 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 AKAP5P24588 427 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 BCAT1P54687 386 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 HSF1Q00613 529 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 STIM1Q13586 685 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 PTCHD3Q3KNS1 767 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 Q6ZTC4 211 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 MMP21Q8N119 569 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 LINC01465Q8N7H1 131 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 PRPF38AQ8NAV1 312 aaKnown RBP4.96□□□□□ -1.62
CLK4-207ENST00000520909 HSPBAP1Q96EW2 488 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 MRGPRX1Q96LB2 322 aa4.96□□□□□ -1.62
CLK4-207ENST00000520909 P2RX7Q99572 595 aaKnown RBP4.96□□□□□ -1.62
CLK4-207ENST00000520909 SMAD5Q99717 465 aaKnown RBP4.96□□□□□ -1.62
CLK4-207ENST00000520909 MS4A7Q9GZW8 240 aaPredicted RBP4.96□□□□□ -1.62
CLK4-207ENST00000520909 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.96□□□□□ -1.62
CLK4-207ENST00000520909 ADGRB2O60241 1585 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 NWD1Q149M9 1564 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 BRD4O60885 1362 aaPredicted RBP4.95□□□□□ -1.62
CLK4-207ENST00000520909 NSD2O96028 1365 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 MSH6P52701 1360 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 EDC4Q6P2E9 1401 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms