RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 ETNK2Q9NVF9 386 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 EURLQ9NYK6 297 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 RABGEF1Q9UJ41 708 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 DSEQ9UL01 958 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ZMYND8Q9ULU4 1186 aaPredicted RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CHMP2BQ9UQN3 213 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 TDRD15B5MCY1 1934 aaKnown RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CLUHO75153 1309 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ARHGEF37A1IGU5 675 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 FAM47DPA6NHR8 397 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 FOXO6A8MYZ6 492 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 HACD1B0YJ81 288 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 POMCP01189 267 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ELNP15502 786 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CREB1P16220 341 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 GOT1P17174 413 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 AMPD1P23109 780 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 GCAP28676 217 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SSTR1P30872 391 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ELK3P41970 407 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 MSH2P43246 934 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 NDUFV1P49821 464 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 AFF1P51825 1210 aaKnown RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 GBE1Q04446 702 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 IFT88Q13099 833 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 LPIN1Q14693 890 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 UPP1Q16831 310 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CCDC121Q6ZUS5 278 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 RNF180Q86T96 592 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 TRABD2AQ86V40 505 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 LRRC34Q8IZ02 419 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CCDC197Q8NCU1 140 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 GDAP1Q8TB36 358 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SLC7A14Q8TBB6 771 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 FBF1Q8TES7 1133 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 TFB1MQ8WVM0 346 aaKnown RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 PCED1BQ96HM7 432 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SGSM3Q96HU1 749 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 NPY6RQ99463 290 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ADAM2Q99965 735 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 TRABDQ9H4I3 376 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ACSS3Q9H6R3 686 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CNGB3Q9NQW8 809 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 MTMR10Q9NXD2 777 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SMG5Q9UPR3 1016 aaKnown RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 INPP5FQ9Y2H2 1132 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 IKBKGQ9Y6K9 419 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 TSC2P49815 1807 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 A0A0U1RQF3 1178 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 MYBPHLA2RUH7 354 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 ANKRD65E5RJM6 399 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 MGEA5O60502 916 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 GCATO75600 419 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 B3GAT3O94766 335 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 APRTP07741 180 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 AIF1P55008 147 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 DAOAP59103 153 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 YWHAGP61981 247 aaKnown RBP eCLIP8.73□□□□□ -1.01
HMGB4-203ENST00000519684 IL9RQ01113 521 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 SP3Q02447 781 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 ITGA7Q13683 1181 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 DSC3Q14574 896 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 PKN2Q16513 984 aaKnown RBP8.73□□□□□ -1.01
HMGB4-203ENST00000519684 TIGD5Q53EQ6 642 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 NCBP2-AS2Q69YL0 99 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 KCNT2Q6UVM3 1135 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 YTHDF3Q7Z739 585 aaKnown RBP8.73□□□□□ -1.01
HMGB4-203ENST00000519684 C10orf67Q8IYJ2 551 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 PYROXD2Q8N2H3 581 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 C3orf58Q8NDZ4 430 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 CCDC110Q8TBZ0 833 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 RNF139Q8WU17 664 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 CYTH2Q99418 400 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 SMOQ99835 787 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 RRN3Q9NYV6 651 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 THSD7BQ9C0I4 1608 aa8.73□□□□□ -1.01
HMGB4-203ENST00000519684 TCP11X1B4DZS4 312 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 EEF2KO00418 725 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PRPF4O43172 522 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 CREB3O43889 395 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 ZNF189O75820 626 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 LTFP02788 710 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 IGFBP6P24592 240 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 HOXD10P28358 340 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SARNPP82979 210 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 NOGQ13253 232 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 TUSC3Q13454 348 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MTM1Q13496 603 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 FAM26DQ5JW98 314 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SYCP2LQ5T4T6 812 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 FAXCQ5TGI0 409 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 CCSAPQ6IQ19 270 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PDZD4Q76G19 769 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 THEM5Q8N1Q8 247 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SMC1BQ8NDV3 1235 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 CKAP2Q8WWK9 683 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 NT5C3BQ969T7 300 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MYLPFQ96A32 169 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 CFAP36Q96G28 342 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms