RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
PVT1-208ENST00000519481 ZDHHC9Q9Y397 364 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 USP3Q9Y6I4 520 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 MAP1BP46821 2468 aaKnown RBP11.42□□□□□ -0.58
PVT1-208ENST00000519481 CDX4O14627 284 aaPredicted RBP11.41□□□□□ -0.58
PVT1-208ENST00000519481 NDUFS2O75306 463 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 SMC2O95347 1197 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 HMBSP08397 361 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 CEACAM1P13688 526 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 ITPKAP23677 461 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 CORO1AP31146 461 aaKnown RBP11.41□□□□□ -0.58
PVT1-208ENST00000519481 MAPK8P45983 427 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 GFPT1Q06210 699 aaPredicted RBP11.41□□□□□ -0.58
PVT1-208ENST00000519481 ZNF33AQ06730 810 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 ZNF252P-AS1Q0IIN9 211 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 EFEMP1Q12805 493 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 ZCWPW2Q504Y3 356 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 DCAF17Q5H9S7 520 aaPredicted RBP11.41□□□□□ -0.58
PVT1-208ENST00000519481 SYCP2LQ5T4T6 812 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 ARHGAP17Q68EM7 881 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 SLC23A3Q6PIS1 610 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 Q6ZNB5 142 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 TOGARAM2Q6ZUX3 1019 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 SCD5Q86SK9 330 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 HDDC3Q8N4P3 179 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 FRMD1Q8N878 549 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 ANKRD52Q8NB46 1076 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 SLC4A11Q8NBS3 891 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 SEMA4DQ92854 862 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 EEF2KMTQ96G04 330 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 GABRG3Q99928 467 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 LRRC4Q9HBW1 653 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 OLA1Q9NTK5 396 aaKnown RBP11.41□□□□□ -0.58
PVT1-208ENST00000519481 PLK2Q9NYY3 685 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 HESX1Q9UBX0 185 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 PILRBQ9UKJ0 227 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 SLC6A14Q9UN76 642 aa11.41□□□□□ -0.58
PVT1-208ENST00000519481 ATXN2Q99700 1313 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 IGHV1OR15-9A0A0B4J2B8 117 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 SLC12A8A0AV02 714 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 PRRT4C9JH25 899 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 SLC16A3O15427 465 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 SYNCRIPO60506 623 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 CISD3P0C7P0 127 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 ENGP17813 658 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 NDUFV2P19404 249 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 RDXP35241 583 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 ZNF132P52740 706 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 BCAT1P54687 386 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 RAD23BP54727 409 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 YWHAGP61981 247 aaKnown RBP eCLIP11.4□□□□□ -0.58
PVT1-208ENST00000519481 FKBP3Q00688 224 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 ARID5AQ03989 594 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 FOXC1Q12948 553 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 STIM1Q13586 685 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 SGO2Q562F6 1265 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 ZNF658Q5TYW1 1059 aaPredicted RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 KIAA1324Q6UXG2 1013 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 PIGZQ86VD9 579 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 SMYD4Q8IYR2 804 aaPredicted RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 RGL4Q8IZJ4 473 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 DEFB119Q8N690 84 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 RNF139Q8WU17 664 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 FOXJ1Q92949 421 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 IPO9Q96P70 1041 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 GSDMAQ96QA5 445 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 ACOX2Q99424 681 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 GTPBP2Q9BX10 602 aaKnown RBP11.4□□□□□ -0.58
PVT1-208ENST00000519481 GDPD2Q9HCC8 539 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 TMEM74BQ9NUR3 256 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 CACNA2D2Q9NY47 1150 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 FBXO10Q9UK96 956 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 CYP8B1Q9UNU6 501 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 SLC27A6Q9Y2P4 619 aa11.4□□□□□ -0.58
PVT1-208ENST00000519481 GIPC1O14908 333 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 XPO1O14980 1071 aaKnown RBP11.39□□□□□ -0.59
PVT1-208ENST00000519481 KRT37O76014 449 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 ZBED1O96006 694 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 PENKP01210 267 aaPredicted RBP11.39□□□□□ -0.59
PVT1-208ENST00000519481 SYPP08247 313 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 SERPINF2P08697 491 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 CD19P15391 556 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 GNSP15586 552 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 TBXAS1P24557 533 aaPredicted RBP11.39□□□□□ -0.59
PVT1-208ENST00000519481 PRCPP42785 496 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 HARS2P49590 506 aaKnown RBP11.39□□□□□ -0.59
PVT1-208ENST00000519481 TKTL1P51854 596 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 MCCD1P59942 119 aaPredicted RBP11.39□□□□□ -0.59
PVT1-208ENST00000519481 LRRC63Q05C16 580 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 PNOCQ13519 176 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 CUL2Q13617 745 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 GOLGA7BQ2TAP0 167 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 RAB41Q5JT25 222 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 WDR45BQ5MNZ6 344 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 PEAR1Q5VY43 1037 aaPredicted RBP11.39□□□□□ -0.59
PVT1-208ENST00000519481 ANKS1BQ7Z6G8 1248 aa11.39□□□□□ -0.59
PVT1-208ENST00000519481 DENND1CQ8IV53 801 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms