RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 ARHGAP44Q17R89 818 aa25.75■■□□□ 1.71
PVT1-204ENST00000517525 CCDC183Q5T5S1 534 aa25.75■■□□□ 1.71
PVT1-204ENST00000517525 DENND1BQ6P3S1 775 aa25.75■■□□□ 1.71
PVT1-204ENST00000517525 FMNL3Q8IVF7 1028 aa25.75■■□□□ 1.71
PVT1-204ENST00000517525 BBS2Q9BXC9 721 aa25.75■■□□□ 1.71
PVT1-204ENST00000517525 AGO1Q9UL18 857 aaKnown RBP25.75■■□□□ 1.71
PVT1-204ENST00000517525 MMP17Q9ULZ9 603 aa25.75■■□□□ 1.71
PVT1-204ENST00000517525 THAP12O43422 761 aa25.74■■□□□ 1.71
PVT1-204ENST00000517525 LTFP02788 710 aa25.74■■□□□ 1.71
PVT1-204ENST00000517525 TYRP14679 529 aa25.74■■□□□ 1.71
PVT1-204ENST00000517525 SASS6Q6UVJ0 657 aa25.74■■□□□ 1.71
PVT1-204ENST00000517525 FAM71AQ8IYT1 594 aa25.74■■□□□ 1.71
PVT1-204ENST00000517525 TERB1Q8NA31 727 aa25.74■■□□□ 1.71
PVT1-204ENST00000517525 LHX5Q9H2C1 402 aa25.74■■□□□ 1.71
PVT1-204ENST00000517525 FOXN3O00409 490 aaPredicted RBP25.73■■□□□ 1.71
PVT1-204ENST00000517525 CISD3P0C7P0 127 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 PTK2Q05397 1052 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 STX1AQ16623 288 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 KLHDC7AQ5VTJ3 777 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 GRAMD4Q6IC98 578 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 TPGS1Q6ZTW0 290 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 NAT16Q8N8M0 369 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 EDEM1Q92611 657 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 TRIM62Q9BVG3 475 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 IRX2Q9BZI1 471 aaPredicted RBP25.73■■□□□ 1.71
PVT1-204ENST00000517525 ACP6Q9NPH0 428 aa25.73■■□□□ 1.71
PVT1-204ENST00000517525 AJAP1Q9UKB5 411 aaPredicted RBP25.73■■□□□ 1.71
PVT1-204ENST00000517525 TBC1D3BA6NDS4 549 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 NEDD8-MDP1E9PL57 170 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 GFRA2O00451 464 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 APBB3O95704 486 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 IGLV3-27P01718 113 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 HOXC13P31276 330 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 HARS2P49590 506 aaKnown RBP25.72■■□□□ 1.71
PVT1-204ENST00000517525 BPIFB4P59827 614 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 ZNF445P59923 1031 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 RING1Q06587 406 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 C2orf27AQ580R0 203 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 HSP90AA4PQ58FG1 418 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 FYB2Q5VWT5 728 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 DENND1CQ8IV53 801 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 SFTPA1Q8IWL2 248 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 IL17RCQ8NAC3 791 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 GOLGA1Q92805 767 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 AZIN2Q96A70 460 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 NAA15Q9BXJ9 866 aaKnown RBP25.72■■□□□ 1.71
PVT1-204ENST00000517525 PLCB1Q9NQ66 1216 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 DNAJC17Q9NVM6 304 aaKnown RBP25.72■■□□□ 1.71
PVT1-204ENST00000517525 CYTH4Q9UIA0 394 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 SLC27A6Q9Y2P4 619 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 ATG2BQ96BY7 2078 aa25.72■■□□□ 1.71
PVT1-204ENST00000517525 FYNP06241 537 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 HMBSP08397 361 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 CLCN1P35523 988 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 USP8P40818 1118 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 DGKEP52429 567 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 KDSRQ06136 332 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 NNTQ13423 1086 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 CRY1Q16526 586 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 HEATR6Q6AI08 1181 aaKnown RBP25.71■■□□□ 1.71
PVT1-204ENST00000517525 LAIR1Q6GTX8 287 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 SCUBE3Q8IX30 993 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 WDTC1Q8N5D0 677 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 CLEC4CQ8WTT0 213 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 GAB3Q8WWW8 586 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 P2RY11Q96G91 374 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 POLR3BQ9NW08 1133 aaPredicted RBP25.71■■□□□ 1.71
PVT1-204ENST00000517525 SFMBT1Q9UHJ3 866 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 KIAA1549LQ6ZVL6 1849 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 ZNF292O60281 2723 aa25.71■■□□□ 1.71
PVT1-204ENST00000517525 AXIN1O15169 862 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 PAPSS1O43252 624 aaPredicted RBP25.7■■□□□ 1.7
PVT1-204ENST00000517525 SEC13P55735 322 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 PDCLQ13371 301 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 SIM2Q14190 667 aaPredicted RBP25.7■■□□□ 1.7
PVT1-204ENST00000517525 KRT31Q15323 416 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 EOGTQ5NDL2 527 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 C11orf57Q6ZUT1 292 aaPredicted RBP25.7■■□□□ 1.7
PVT1-204ENST00000517525 TRMT11Q7Z4G4 463 aaKnown RBP25.7■■□□□ 1.7
PVT1-204ENST00000517525 RASSF3Q86WH2 238 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 GPR161Q8N6U8 529 aaKnown RBP25.7■■□□□ 1.7
PVT1-204ENST00000517525 HHIPQ96QV1 700 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 SLC2A11Q9BYW1 496 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 ST7Q9NRC1 585 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 RAB23Q9ULC3 237 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 DAAM1Q9Y4D1 1078 aa25.7■■□□□ 1.7
PVT1-204ENST00000517525 ANTXRLA6NF34 631 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 LRRC10BA6NIK2 292 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 PIK3R2O00459 728 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 UCHL3P15374 230 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 MYL5Q02045 173 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 EMC10Q5UCC4 262 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 ALLCQ8N6M5 410 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 MIS12Q9H081 205 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 FANCLQ9NW38 375 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 HCN2Q9UL51 889 aa25.69■■□□□ 1.7
PVT1-204ENST00000517525 TRIM24O15164 1050 aa25.68■■□□□ 1.7
PVT1-204ENST00000517525 CYBBP04839 570 aa25.68■■□□□ 1.7
PVT1-204ENST00000517525 GLI1P08151 1106 aa25.68■■□□□ 1.7
PVT1-204ENST00000517525 DGKGP49619 791 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms