RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 COPAP53621 1224 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 MFAP3P55082 362 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 SNRPFP62306 86 aaKnown RBP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 RING1Q06587 406 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 DPYDQ12882 1025 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 COL9A2Q14055 689 aaPredicted RBP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 FUT11Q495W5 492 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 DAB2IPQ5VWQ8 1189 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 GRAMD4Q6IC98 578 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 SMYD4Q8IYR2 804 aaPredicted RBP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 PGBD3Q8N328 593 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 SLC4A11Q8NBS3 891 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 WFDC5Q8TCV5 224 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 OTUB2Q96DC9 234 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 CYFIP2Q96F07 1278 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 GTPBP2Q9BX10 602 aaKnown RBP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 BBS2Q9BXC9 721 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 WSB2Q9NYS7 404 aaPredicted RBP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 BCCIPQ9P287 314 aaKnown RBP eCLIP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 AGO1Q9UL18 857 aaKnown RBP8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 SLC6A14Q9UN76 642 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 SH3BP1Q9Y3L3 701 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 PLXNB3Q9ULL4 1909 aa8.72□□□□□ -1.01
SCARNA20.3-201ENST00000516913 ZNF462Q96JM2 2506 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 FAM237AA0A1B0GTK4 181 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 C10orf142B7Z368 130 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PDXKO00764 312 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 KCNK3O14649 394 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PHACTR2O75167 634 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 HMBSP08397 361 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PDIA4P13667 645 aaKnown RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 HLA-EP13747 358 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 CD58P19256 250 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 NDUFA8P51970 172 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PMS1P54277 932 aaKnown RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 RAD23BP54727 409 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 SGSM1Q2NKQ1 1148 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 HSF5Q4G112 596 aaPredicted RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ZNF394Q53GI3 561 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 SPDYCQ5MJ68 293 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 LAYNQ6UX15 382 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 UNC93AQ86WB7 457 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 CHPFQ8IZ52 775 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 UBR7Q8N806 425 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ZNF366Q8N895 744 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PDZD8Q8NEN9 1154 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 SNX21Q969T3 373 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 TOE1Q96GM8 510 aaKnown RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 LMLNQ96KR4 655 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 BBC3Q96PG8 261 aaPredicted RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 DUSP16Q9BY84 665 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 POLMQ9NP87 494 aaPredicted RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 DNAAF2Q9NVR5 837 aaKnown RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 COMMD8Q9NX08 183 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 USP36Q9P275 1121 aaKnown RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 THAP10Q9P2Z0 257 aaPredicted RBP8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 TRAF3IP3Q9Y228 551 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 BTBD3Q9Y2F9 522 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 MSRB2Q9Y3D2 182 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 STON1Q9Y6Q2 735 aa8.71□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 WNT9AO14904 365 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 IKBKBO14920 756 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ALDH1A2O94788 518 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 DKK1O94907 266 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 C7P10643 843 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ATP5C1P36542 298 aaKnown RBP8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ME1P48163 572 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 DGKGP49619 791 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 TPMTP51580 245 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 AMPD3Q01432 767 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 EFEMP1Q12805 493 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 GRIK2Q13002 908 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PTPRNQ16849 979 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 DUOXA1Q1HG43 343 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 RAB41Q5JT25 222 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 C10orf120Q5SQS8 335 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 KLHDC10Q6PID8 442 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 STXBP4Q6ZWJ1 553 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 CCDC186Q7Z3E2 898 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 PIGZQ86VD9 579 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 C11orf74Q86VG3 221 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 DDX42Q86XP3 938 aaKnown RBP eCLIP8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 CACUL1Q86Y37 369 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 FAM217AQ8IXS0 508 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 BAHD1Q8TBE0 780 aaPredicted RBP8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 DNASE2BQ8WZ79 361 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 TFAP2BQ92481 460 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 CRELD1Q96HD1 420 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 TNIP3Q96KP6 325 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ZNF396Q96N95 335 aaPredicted RBP8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 GPR174Q9BXC1 333 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 NUSAP1Q9BXS6 441 aaKnown RBP8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 EBF2Q9HAK2 575 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 ITM2CQ9NQX7 267 aa8.7□□□□□ -1.02
SCARNA20.3-201ENST00000516913 CGNQ9P2M7 1197 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms