RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 MYOCQ99972 504 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 MLH1P40692 756 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 TUBP50607 506 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 SEMA3FQ13275 785 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 COL26A1Q96A83 441 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ZCCHC2Q9C0B9 1178 aaKnown RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 AHSPQ9NZD4 102 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 NUDT5Q9UKK9 219 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 RENBPP51606 427 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 CENPCQ03188 943 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ATP6AP1LQ52LC2 224 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 KLHDC7AQ5VTJ3 777 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 BNIPLQ7Z465 357 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 UXS1Q8NBZ7 420 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ADAM2Q99965 735 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 C17orf75Q9HAS0 396 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 GPAMQ9HCL2 828 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 RGS18Q9NS28 235 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ZNHIT2Q9UHR6 403 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 SLC9A8Q9Y2E8 581 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 SLC26A4O43511 780 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ATP5BP06576 529 aaKnown RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ATP6V1B2P21281 511 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 BST2Q10589 180 aaKnown RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 NFIL3Q16649 462 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 TYW3Q6IPR3 259 aaKnown RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 POTEAQ6S8J7 498 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 GLT6D1Q7Z4J2 308 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 EMC1Q8N766 993 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 FAM111AQ96PZ2 611 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 KLHL28Q9NXS3 571 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ADAM21Q9UKJ8 722 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 SIK3Q9Y2K2 1263 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF23P17027 643 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 TPH1P17752 444 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ADCYAP1R1P41586 468 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 TRIP10Q15642 601 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 DEFB115Q30KQ5 88 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 MARC1Q5VT66 337 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 TRIT1Q9H3H1 467 aaKnown RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 STMN3Q9NZ72 180 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 GPN3Q9UHW5 284 aaPredicted RBP11.32□□□□□ -0.6
TRIM41-209ENST00000515834 CNTNAP4Q9C0A0 1308 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 SDR42E2A6NKP2 422 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TLL1O43897 1013 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 LTFP02788 710 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 BCL2L1Q07817 233 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 IPCEF1Q8WWN9 437 aaPredicted RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PPP1R10Q96QC0 940 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PPP2R3BQ9Y5P8 575 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 A0A1B0GW55 424 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PHF20L1A8MW92 1017 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 DUX4L2P0CJ85 424 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 DUX4L3P0CJ86 424 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 DUX4L4P0CJ87 422 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 DUX4L5P0CJ88 424 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 DUX4L6P0CJ89 424 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 DUX4L7P0CJ90 424 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 HSMCR30P0CW71 290 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PSMA4P25789 261 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TMEM154Q6P9G4 183 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TRMT2AQ8IZ69 625 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 OSCP1Q8WVF1 389 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TPD52L3Q96J77 140 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 AGO4Q9HCK5 861 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 DUX4Q9UBX2 424 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 MED24O75448 989 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 OR56A5P0C7T3 313 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 COILP38432 576 aaPredicted RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TRIM28Q13263 835 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 NR6A1Q15406 480 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 METTL7BQ6UX53 244 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 SCAIQ8N9R8 606 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 ATG4AQ8WYN0 398 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 HTATIP2Q9BUP3 242 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 CCDC134Q9H6E4 229 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 SAE1Q9UBE0 346 aaPredicted RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 ZMYM5Q9UJ78 669 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF609O15014 1411 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 O00370 1275 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 RAD51CO43502 376 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PEX1O43933 1283 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 MT-CO1P00395 513 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TYMPP19971 482 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.61e-8■■□□□ 13.3
TRIM41-209ENST00000515834 PPIL2Q13356 520 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 GJC2Q5T442 439 aaPredicted RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 HDDC2Q7Z4H3 204 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 CBWD1Q9BRT8 395 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 ROGDIQ9GZN7 287 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 HS6ST1O60243 411 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms