RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CCNL1Q9UK58 526 aaPredicted RBP3.82□□□□□ -1.8
HERC4-215ENST00000515753 AFG3L2Q9Y4W6 797 aa3.82□□□□□ -1.8
HERC4-215ENST00000515753 LRP12Q9Y561 859 aa3.82□□□□□ -1.8
HERC4-215ENST00000515753 CYP2D7A0A087X1C5 515 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 CCDC187A0A096LP49 1063 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 CES2O00748 559 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 KPNA5O15131 536 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 SNX2O60749 519 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 CBFA2T3O75081 653 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 ARP10275 920 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 LINC00205P59089 165 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 EIF4A1P60842 406 aaKnown RBP3.81□□□□□ -1.8
HERC4-215ENST00000515753 RAPGEF1Q13905 1077 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 KCNAB1Q14722 419 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 ACOX1Q15067 660 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 TRIP6Q15654 476 aaKnown RBP3.81□□□□□ -1.8
HERC4-215ENST00000515753 SLC5A9Q2M3M2 681 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 CERKLQ49MI3 558 aaPredicted RBP3.81□□□□□ -1.8
HERC4-215ENST00000515753 KSR2Q6VAB6 950 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 ZNF813Q6ZN06 617 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 KIAA0408Q6ZU52 694 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 TICAM2Q86XR7 235 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 METTL25Q8N6Q8 603 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 NANOGP1Q8N7R0 232 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 NRACQ8N912 160 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 NGDNQ8NEJ9 315 aaKnown RBP3.81□□□□□ -1.8
HERC4-215ENST00000515753 PRSS3P2Q8NHM4 247 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 SUN3Q8TAQ9 357 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 PNISRQ8TF01 805 aaKnown RBP3.81□□□□□ -1.8
HERC4-215ENST00000515753 KAZALD1Q96I82 304 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 ZBTB45Q96K62 511 aaPredicted RBP3.81□□□□□ -1.8
HERC4-215ENST00000515753 HIST1H2AAQ96QV6 131 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 ADGRE3Q9BY15 652 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 MAGEB5Q9BZ81 275 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 SLC25A32Q9H2D1 315 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 TFCP2L1Q9NZI6 479 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 FAM50BQ9Y247 325 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 SLC27A6Q9Y2P4 619 aa3.81□□□□□ -1.8
HERC4-215ENST00000515753 SPATA31A1Q5TZJ5 1347 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 WDR17Q8IZU2 1322 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 APOL1O14791 398 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 FGF18O76093 207 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 PDE8BO95263 885 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 MT-CO3P00414 261 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 CREB1P16220 341 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 EGR1P18146 543 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 GABRB3P28472 473 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 ALDH5A1P51649 535 aaPredicted RBP3.8□□□□□ -1.8
HERC4-215ENST00000515753 ITGA8P53708 1063 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 CFHR3Q02985 330 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 MTAPQ13126 283 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 STK3Q13188 491 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 FHL3Q13643 280 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 LAMB3Q13751 1172 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 MORC3Q14149 939 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 FAM187BQ17R55 369 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 ABLIM2Q6H8Q1 611 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 IRF2BP2Q7Z5L9 587 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 ZDHHC17Q8IUH5 632 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 OR2C3Q8N628 320 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.8□□□□□ -1.8
HERC4-215ENST00000515753 ADAMTS18Q8TE60 1221 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 EDC3Q96F86 508 aaKnown RBP3.8□□□□□ -1.8
HERC4-215ENST00000515753 CHST12Q9NRB3 414 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 SEMA5BQ9P283 1151 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 HMGXB3Q12766 1538 aa3.8□□□□□ -1.8
HERC4-215ENST00000515753 SH3BP5O60239 455 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 EXOC3O60645 756 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 BCAR3O75815 825 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 WDR47O94967 919 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 CYP2A6P11509 494 aaPredicted RBP3.79□□□□□ -1.8
HERC4-215ENST00000515753 IDEP14735 1019 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 ATF7P17544 494 aaPredicted RBP3.79□□□□□ -1.8
HERC4-215ENST00000515753 ATICP31939 592 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 DGKQP52824 942 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 AK2P54819 239 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 TXNL4AP83876 142 aaKnown RBP3.79□□□□□ -1.8
HERC4-215ENST00000515753 PICALMQ13492 652 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 PMS2P11Q13670 270 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 SLC35G1Q2M3R5 365 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 AASDHQ4L235 1098 aaPredicted RBP3.79□□□□□ -1.8
HERC4-215ENST00000515753 FAXCQ5TGI0 409 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 KLHDC7AQ5VTJ3 777 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 IZUMO3Q5VZ72 239 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 TLDC1Q6P9B6 456 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 CRTC1Q6UUV9 634 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 LIX1LQ8IVB5 337 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 CCDC33Q8N5R6 958 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 HIC2Q96JB3 615 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 VPS50Q96JG6 964 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 SNX27Q96L92 541 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 TBCBQ99426 244 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 NUDT22Q9BRQ3 303 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 RNF26Q9BY78 433 aaPredicted RBP3.79□□□□□ -1.8
HERC4-215ENST00000515753 NECTIN3Q9NQS3 549 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 TBC1D23Q9NUY8 699 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 TMOD4Q9NZQ9 345 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 MGAT4CQ9UBM8 478 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 FZD4Q9ULV1 537 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 CA14Q9ULX7 337 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms