RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 SMIM23A6NLE4 172 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 RASGRF2O14827 1237 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 MYCP01106 439 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 GOT1P17174 413 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 OR1G1P47890 313 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 MAGOHP61326 146 aaKnown RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 ANKRD22Q5VYY1 191 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 PM20D1Q6GTS8 502 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 NAT8LQ8N9F0 302 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 SLC7A14Q8TBB6 771 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 ELAC1Q9H777 363 aaKnown RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 SAYSD1Q9NPB0 183 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 TMPRSS4Q9NRS4 437 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 BCLAF3A2AJT9 711 aaKnown RBP16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 CFAP69A5D8W1 941 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 IRAK1P51617 712 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 GBE1Q04446 702 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 IRGQQ8WZA9 623 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 RTP4Q96DX8 246 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 FAM193BQ96PV7 902 aaPredicted RBP16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 PNPLA8Q9NP80 782 aa16.03■□□□□ 0.16
THUMPD3-210ENST00000515662 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 RGS16O15492 202 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 MAP3K6O95382 1288 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 NCAM1P13591 858 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 AMPD1P23109 780 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 ARL4AP40617 200 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 SLCO1A2P46721 670 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 NR2C2P49116 596 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 SLC10A2Q12908 348 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 MTFR1Q15390 333 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 SCML4Q8N228 414 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 ARFGAP2Q8N6H7 521 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 ADAM32Q8TC27 787 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 PGAP3Q96FM1 320 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 SLC9A7Q96T83 725 aa16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 PRG3Q9Y2Y8 225 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-210ENST00000515662 GOLGA8MH3BSY2 632 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 KCNN4O15554 427 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 OAZ2O95190 189 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 RBL1P28749 1068 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 GNGT1P63211 74 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 AUHQ13825 339 aaKnown RBP16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 NCBP2-AS2Q69YL0 99 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 MFSD5Q6N075 450 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 CENPUQ71F23 418 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 SPATA2LQ8IUW3 424 aaPredicted RBP16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 TAB3Q8N5C8 712 aaPredicted RBP16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 WDR6Q9NNW5 1121 aaKnown RBP16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 ETNK2Q9NVF9 386 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 RRN3Q9NYV6 651 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 PCDHB7Q9Y5E2 793 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 NLRC5Q86WI3 1866 aa16.02■□□□□ 0.15
THUMPD3-210ENST00000515662 A6NNZ2 444 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 ALOX15BO15296 676 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TCEA3O75764 348 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 ADRA1BP35368 520 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 PPP2R2AP63151 447 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 GAD2Q05329 585 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 XRCC4Q13426 336 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 FASTKD3Q14CZ7 662 aaKnown RBP16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 LONRF1Q17RB8 773 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TUBB8Q3ZCM7 444 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TNFAIP8L3Q5GJ75 292 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 EFHC2Q5JST6 749 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 C4orf50Q6ZRC1 276 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 CDKL3Q8IVW4 592 aaPredicted RBP16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 SEPT8Q92599 483 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 EDEM1Q92611 657 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 PRDM16Q9HAZ2 1276 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 OGDHLQ9ULD0 1010 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 COL4A4P53420 1690 aaPredicted RBP16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TCRBV7S3A2A0A539 114 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 H3BRJ5 948 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 SMAPO00193 183 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 PQBP1O60828 265 aaKnown RBP16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TMEM63AO94886 807 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 AGTP01019 485 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 ABHD2P08910 425 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 AIF1P55008 147 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 IFI35P80217 286 aaPredicted RBP16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 HIF1AQ16665 826 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TCTN1Q2MV58 587 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 BSPRYQ5W0U4 402 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 ABI1Q8IZP0 508 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 RNF139Q8WU17 664 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 NTAN1Q96AB6 310 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 TTC25Q96NG3 672 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 SERPINB12Q96P63 405 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 PHACTR1Q9C0D0 580 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 ZCWPW1Q9H0M4 648 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 DDIT4Q9NX09 232 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 PAK5Q9P286 719 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 FBXW11Q9UKB1 542 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms