RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 MAFFQ9ULX9 164 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 HPSEQ9Y251 543 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 HS3ST3B1Q9Y662 390 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 FAM90A8PA6NJQ4 464 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 B4DGG1 531 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 SNX2O60749 519 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 FAM90A13PP0C7W8 464 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 FAM90A24PP0C7X0 464 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 RPS13P62277 151 aaKnown RBP4.64□□□□□ -1.67
LINC01088-211ENST00000515597 GPC5P78333 572 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 FHL3Q13643 280 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 DAG1Q14118 895 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 SEMA3AQ14563 771 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 MFSD13AQ14CX5 517 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 CLEC9AQ6UXN8 241 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 KRT28Q7Z3Y7 464 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 PIM3Q86V86 326 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 DGKHQ86XP1 1220 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.64□□□□□ -1.67
LINC01088-211ENST00000515597 SPATA3Q8NHX4 192 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 MBD3L2Q8NHZ7 208 aaPredicted RBP4.64□□□□□ -1.67
LINC01088-211ENST00000515597 TTC17Q96AE7 1141 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 VPS50Q96JG6 964 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 ZFYVE19Q96K21 471 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 CAMK1GQ96NX5 476 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 FAM234AQ9H0X4 552 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 ZBTB40Q9NUA8 1239 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 SEMA5BQ9P283 1151 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 KLHL42Q9P2K6 505 aa4.64□□□□□ -1.67
LINC01088-211ENST00000515597 CLIC1O00299 241 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 SMAD6O43541 496 aaKnown RBP4.63□□□□□ -1.67
LINC01088-211ENST00000515597 IL18RAPO95256 599 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 TXNL4AP83876 142 aaKnown RBP4.63□□□□□ -1.67
LINC01088-211ENST00000515597 MTX1Q13505 466 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 ERV3-1Q14264 604 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 SLC9C1Q4G0N8 1177 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 ZNF549Q6P9A3 640 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 RNF44Q7L0R7 432 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 TIFAQ96CG3 184 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 HIC2Q96JB3 615 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 LYZL4Q96KX0 146 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 APOL5Q9BWW9 433 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 HIPK2Q9H2X6 1198 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 PNPLA8Q9NP80 782 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 HEYLQ9NQ87 328 aaPredicted RBP4.63□□□□□ -1.67
LINC01088-211ENST00000515597 TBC1D23Q9NUY8 699 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.63□□□□□ -1.67
LINC01088-211ENST00000515597 SNX13Q9Y5W8 968 aa4.63□□□□□ -1.67
LINC01088-211ENST00000515597 TRIP12Q14669 1992 aaPredicted RBP4.63□□□□□ -1.67
LINC01088-211ENST00000515597 TCF20Q9UGU0 1960 aaKnown RBP4.62□□□□□ -1.67
LINC01088-211ENST00000515597 A0A087WZ62 844 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.62□□□□□ -1.67
LINC01088-211ENST00000515597 CLCA1A8K7I4 914 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 RHPN2P1A8MT19 583 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 GTPBP1O00178 669 aaKnown RBP4.62□□□□□ -1.67
LINC01088-211ENST00000515597 FYB1O15117 783 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 PRAMEF2O60811 474 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 TULP3O75386 442 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 WDR47O94967 919 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 MBPP02686 304 aaPredicted RBP4.62□□□□□ -1.67
LINC01088-211ENST00000515597 TMEM225BP0DP42 221 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 MTAPQ13126 283 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 DNASE1L3Q13609 305 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 GRHL2Q6ISB3 625 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 ZNF793Q6ZN11 406 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 WDR75Q8IWA0 830 aaKnown RBP4.62□□□□□ -1.67
LINC01088-211ENST00000515597 C16orf71Q8IYS4 520 aaPredicted RBP4.62□□□□□ -1.67
LINC01088-211ENST00000515597 PELI3Q8N2H9 469 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 SUN3Q8TAQ9 357 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 IQCDQ96DY2 449 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 TRMOQ9BU70 441 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 SLC25A32Q9H2D1 315 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 USP29Q9HBJ7 922 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 PROCRQ9UNN8 238 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 SPATA31A1Q5TZJ5 1347 aa4.62□□□□□ -1.67
LINC01088-211ENST00000515597 AREL1O15033 823 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 THAP12O43422 761 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 CA12O43570 354 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 TNFRSF1BP20333 461 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 PIK3CBP42338 1070 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 CCDC15Q0P6D6 951 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 ACOX1Q15067 660 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 FMNL3Q8IVF7 1028 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 FSTL5Q8N475 847 aaPredicted RBP4.61□□□□□ -1.67
LINC01088-211ENST00000515597 FAM71DQ8N9W8 422 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 WDR24Q96S15 920 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 CINPQ9BW66 212 aaPredicted RBP4.61□□□□□ -1.67
LINC01088-211ENST00000515597 SCNM1Q9BWG6 230 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 AS3MTQ9HBK9 375 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 VPS45Q9NRW7 570 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 CORO2BQ9UQ03 480 aa4.61□□□□□ -1.67
LINC01088-211ENST00000515597 KCNQ3O43525 872 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 CBFA2T3O75081 653 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 ARP10275 920 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 TACR3P29371 465 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 CPA2P48052 419 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 HSF1Q00613 529 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 ZNF543Q08ER8 600 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 KCNJ12Q14500 433 aa4.6□□□□□ -1.67
LINC01088-211ENST00000515597 KPNB1Q14974 876 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms