RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CTNND2Q9UQB3 1225 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 PPP1R3GB7ZBB8 358 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 TRIM24O15164 1050 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 CAVIN2O95810 425 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 GNA14O95837 355 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 PENKP01210 267 aaPredicted RBP18.32■□□□□ 0.52
DDX41-217ENST00000515562 KLKB1P03952 638 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 BCKDHBP21953 392 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 BMP6P22004 513 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 ADIGQ0VDE8 80 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 PAK1Q13153 545 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 EGFLAMQ63HQ2 1017 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 SDE2Q6IQ49 451 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 TMEM270Q6UE05 265 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 CYP2U1Q7Z449 544 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 CHPFQ8IZ52 775 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 PGBD3Q8N328 593 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 PPM1KQ8N3J5 372 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 PLD4Q96BZ4 506 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 SMOC1Q9H4F8 434 aa18.32■□□□□ 0.52
DDX41-217ENST00000515562 TULP2O00295 520 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 ZBTB24O43167 697 aaPredicted RBP18.31■□□□□ 0.52
DDX41-217ENST00000515562 CYBBP04839 570 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 HMBSP08397 361 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 STILQ15468 1287 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 PPM1JQ5JR12 505 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 SPDYCQ5MJ68 293 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 LCLAT1Q6UWP7 414 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 TOGARAM2Q6ZUX3 1019 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 LPCAT2Q7L5N7 544 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 BHLHA9Q7RTU4 235 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 SCML4Q8N228 414 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 KCTD13Q8WZ19 329 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 BHMTQ93088 406 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 CNGB3Q9NQW8 809 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 RXFP3Q9NSD7 469 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 PLK2Q9NYY3 685 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 AGO1Q9UL18 857 aaKnown RBP18.31■□□□□ 0.52
DDX41-217ENST00000515562 SLC27A6Q9Y2P4 619 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 PCDHB4Q9Y5E5 795 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 NUP205Q92621 2012 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 NCOR2Q9Y618 2525 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 THADAQ6YHU6 1953 aa18.31■□□□□ 0.52
DDX41-217ENST00000515562 SLC12A8A0AV02 714 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 GFRA2O00451 464 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 BIN1O00499 593 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 MAP3K13O43283 966 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 GADD45BO75293 160 aaPredicted RBP18.3■□□□□ 0.52
DDX41-217ENST00000515562 CISD3P0C7P0 127 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 DHPSP49366 369 aaPredicted RBP18.3■□□□□ 0.52
DDX41-217ENST00000515562 MARSP56192 900 aaKnown RBP18.3■□□□□ 0.52
DDX41-217ENST00000515562 GCNT1Q02742 428 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 MAP7D1Q3KQU3 841 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 PKDCCQ504Y2 493 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 STPG1Q5TH74 334 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 FYB2Q5VWT5 728 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 TCEAL6Q6IPX3 200 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 DENND1CQ8IV53 801 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 CPXM2Q8N436 756 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 TRIML1Q8N9V2 468 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 RNF139Q8WU17 664 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 RLN3Q8WXF3 142 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 TCEAL3Q969E4 200 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 GABRG3Q99928 467 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 EDEM2Q9BV94 578 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 FBXO10Q9UK96 956 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 HCN2Q9UL51 889 aa18.3■□□□□ 0.52
DDX41-217ENST00000515562 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.3■□□□□ 0.52
DDX41-217ENST00000515562 MYO18AQ92614 2054 aaKnown RBP18.3■□□□□ 0.52
DDX41-217ENST00000515562 A0A1W2PQF6 199 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 PRRT4C9JH25 899 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 KHNYNO15037 678 aaKnown RBP18.29■□□□□ 0.52
DDX41-217ENST00000515562 NPC1O15118 1278 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 GABRG2P18507 467 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 DPP6P42658 865 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 HARS2P49590 506 aaKnown RBP18.29■□□□□ 0.52
DDX41-217ENST00000515562 E2F5Q15329 346 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 TRIP4Q15650 581 aaPredicted RBP18.29■□□□□ 0.52
DDX41-217ENST00000515562 RNF43Q68DV7 783 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 FAM217AQ8IXS0 508 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 LMO3Q8TAP4 145 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 UBA3Q8TBC4 463 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 ABCC13Q9NSE7 274 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 CALCOCO1Q9P1Z2 691 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 HBS1LQ9Y450 684 aaKnown RBP18.29■□□□□ 0.52
DDX41-217ENST00000515562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDX41-217ENST00000515562 ABCA7Q8IZY2 2146 aa18.29■□□□□ 0.52
DDX41-217ENST00000515562 LNP1A1A4G5 178 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 YJEFN3A6XGL0 299 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 E7ENQ6 273 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 M0QYV0 167 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 FGFR1OPO95684 399 aaKnown RBP18.28■□□□□ 0.52
DDX41-217ENST00000515562 AFPP02771 609 aaKnown RBP18.28■□□□□ 0.52
DDX41-217ENST00000515562 ADRB1P08588 477 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 WASP42768 502 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 MFAP3P55082 362 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 ZNF445P59923 1031 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 KCNH2Q12809 1159 aa18.28■□□□□ 0.52
DDX41-217ENST00000515562 CNGA2Q16280 664 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms