RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 SMOC2Q9H3U7 446 aa20.52■□□□□ 0.88
SSBP2-218ENST00000514493 FAM204AQ9H8W3 233 aa20.52■□□□□ 0.88
SSBP2-218ENST00000514493 TLR8Q9NR97 1041 aaKnown RBP20.52■□□□□ 0.88
SSBP2-218ENST00000514493 PIGVQ9NUD9 493 aa20.52■□□□□ 0.88
SSBP2-218ENST00000514493 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.52■□□□□ 0.88
SSBP2-218ENST00000514493 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.52■□□□□ 0.883e-6■■□□□ 12.3
SSBP2-218ENST00000514493 OSER1Q9NX31 292 aa20.52■□□□□ 0.88
SSBP2-218ENST00000514493 TCRBV7S2A1N4TA0A589 114 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 PI4K2BG5E9Z4 385 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 CSPG5O95196 566 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 IGLV3-25P01717 112 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 RALAP11233 206 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 MRPS25P82663 173 aaKnown RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 SLC7A5Q01650 507 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 TWF1Q12792 350 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 CAMK1Q14012 370 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 VEPH1Q14D04 833 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 SIX1Q15475 284 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 RAB30Q15771 203 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 CYP1B1Q16678 543 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 MFSD7Q6UXD7 560 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 FAM131BQ86XD5 332 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 ZDHHC14Q8IZN3 488 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 CMASQ8NFW8 434 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 CCDC26Q8TAB7 109 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 ADAM32Q8TC27 787 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 HSPH1Q92598 858 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 RNF25Q96BH1 459 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 OSBPL8Q9BZF1 889 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 WDR6Q9NNW5 1121 aaKnown RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 DDIT4Q9NX09 232 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 CLIC5Q9NZA1 410 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 MYO9BQ13459 2157 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 C3orf70A6NLC5 250 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 HEXIM1O94992 359 aaKnown RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 F9P00740 461 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 ZDHHC11BP0C7U3 371 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 HMGA1P17096 107 aaKnown RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 KLRC2P26717 231 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 CHRNA3P32297 505 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 NME3Q13232 169 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 KLF1Q13351 362 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 PLD1Q13393 1074 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 MSANTD2Q6P1R3 559 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 SPOCD1Q6ZMY3 1216 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 MAATS1Q7Z4T9 603 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 C12orf50Q8NA57 414 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 OVCA2Q8WZ82 227 aa20.51■□□□□ 0.87
SSBP2-218ENST00000514493 TRMT2BQ96GJ1 504 aaKnown RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 MAGED2Q9UNF1 606 aaPredicted RBP20.51■□□□□ 0.87
SSBP2-218ENST00000514493 SYNJ2BP-COX16A0A087WUM0 186 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 H3BNC9 293 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 SOX1O00570 391 aaPredicted RBP20.5■□□□□ 0.87
SSBP2-218ENST00000514493 IRAK2O43187 625 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 LPXNO60711 386 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 ERLIN1O75477 346 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 GLUD1P00367 558 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 KDELR1P24390 212 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 IRS1P35568 1242 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 CDKN2BP42772 138 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 ARSEP51690 589 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 GPM6BQ13491 265 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 ANKS1BQ7Z6G8 1248 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 CCDC185Q8N715 623 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 PDZD8Q8NEN9 1154 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 RNF139Q8WU17 664 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 MYRFLQ96LU7 910 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 HERPUD2Q9BSE4 406 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 NKX2-4Q9H2Z4 354 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 COX16Q9P0S2 106 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 AMACRQ9UHK6 382 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 MSRAQ9UJ68 235 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 AP4E1Q9UPM8 1137 aa20.5■□□□□ 0.87
SSBP2-218ENST00000514493 ZMYND10O75800 440 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 EPHB3P54753 998 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 LLGL1Q15334 1064 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 TAZQ16635 292 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 TFDP3Q5H9I0 405 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 ERMARDQ5T6L9 678 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 PDE12Q6L8Q7 609 aaKnown RBP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 TMCO3Q6UWJ1 677 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 CCDC149Q6ZUS6 474 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 PSTKQ8IV42 348 aaKnown RBP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 HNRNPLLQ8WVV9 542 aaKnown RBP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 MAGOHBQ96A72 148 aaKnown RBP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 NTAN1Q96AB6 310 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 hCG_1818297A0A087WSY0 165 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 SPATA31D3P0C874 917 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 FNTAP49354 379 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 AIF1P55008 147 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 CDH6P55285 790 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 EIF4EBP2Q13542 120 aaPredicted RBP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 DHX34Q14147 1143 aaKnown RBP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 DPYSL2Q16555 572 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 PPP2R2DQ66LE6 453 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 SPATA31D4Q6ZUB0 917 aa20.49■□□□□ 0.87
SSBP2-218ENST00000514493 SND1Q7KZF4 910 aaKnown RBP eCLIP20.49■□□□□ 0.87
SSBP2-218ENST00000514493 VSIG1Q86XK7 387 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms