RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 LRRC4Q9HBW1 653 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 OLA1Q9NTK5 396 aaKnown RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 MARCH2Q9P0N8 246 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 FBXO10Q9UK96 956 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 AGO1Q9UL18 857 aaKnown RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 PCDHB4Q9Y5E5 795 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 LAMA1P25391 3075 aa10.96□□□□□ -0.66
HMGXB3-205ENST00000514469 CEP250Q9BV73 2442 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 TCRBV21S2A2A0A5A6 115 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 YJEFN3A6XGL0 299 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 PRRT4C9JH25 899 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 E7ENQ6 273 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 M0QYV0 167 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 RNF225M0QZC1 329 aaPredicted RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 GDF9O60383 454 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 HMBSP08397 361 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CISD3P0C7P0 127 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 BCKDHBP21953 392 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CHKAP35790 457 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 P2RY2P41231 377 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 LIMK1P53667 647 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 DAOAP59103 153 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 SF3A2Q15428 464 aaKnown RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 STILQ15468 1287 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 TRIP4Q15650 581 aaPredicted RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CCDC6Q16204 474 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 AASDHQ4L235 1098 aaPredicted RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 EGFLAMQ63HQ2 1017 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 TOGARAM2Q6ZUX3 1019 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 RRAGAQ7L523 313 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 SIX6OS1Q8N1H7 587 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CPXM2Q8N436 756 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 RBBP8NLQ8NC74 664 aaPredicted RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 UBA3Q8TBC4 463 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 NDRG1Q92597 394 aaKnown RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 KREMEN1Q96MU8 473 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 IPO9Q96P70 1041 aaKnown RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 GABRG3Q99928 467 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 SRRTQ9BXP5 876 aaKnown RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 INTS2Q9H0H0 1204 aaKnown RBP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CD248Q9HCU0 757 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CNGB3Q9NQW8 809 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CHMP5Q9NZZ3 219 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 CNTN6Q9UQ52 1028 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 INVSQ9Y283 1065 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 SLC27A6Q9Y2P4 619 aa10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGXB3-205ENST00000514469 MYH10P35580 1976 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 A0A1W2PQF6 199 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 SLC12A8A0AV02 714 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 BCLAF3A2AJT9 711 aaKnown RBP10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 GABBR2O75899 941 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 FGFR1OPO95684 399 aaKnown RBP10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 HOXB2P14652 356 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 NTSR1P30989 418 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 GBP1P32455 592 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 CNGA2Q16280 664 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 CAMK4Q16566 473 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 BSPRYQ5W0U4 402 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 PMF1Q6P1K2 205 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 DENND1CQ8IV53 801 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 FMNL3Q8IVF7 1028 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 C12orf50Q8NA57 414 aaPredicted RBP10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 SLC35F5Q8WV83 523 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 HMGB4Q8WW32 186 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 IRGQQ8WZA9 623 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 BHMTQ93088 406 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 SPACA7Q96KW9 195 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 MED15Q96RN5 788 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 ACOX2Q99424 681 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 SMOC1Q9H4F8 434 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 RXFP3Q9NSD7 469 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 ABCC13Q9NSE7 274 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 PLK2Q9NYY3 685 aa10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 BCCIPQ9P287 314 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 HBS1LQ9Y450 684 aaKnown RBP10.94□□□□□ -0.66
HMGXB3-205ENST00000514469 GFRA2O00451 464 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 LATS1O95835 1130 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 CALCAP01258 141 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 LCP1P13796 627 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 GABRG2P18507 467 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 RGS7P49802 495 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 MFAP3P55082 362 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 CREB5Q02930 508 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 MEA1Q16626 185 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 MAP7D1Q3KQU3 841 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 TCEAL6Q6IPX3 200 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 MSANTD2Q6P1R3 559 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 RNF139Q8WU17 664 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 RLN3Q8WXF3 142 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 EDEM1Q92611 657 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 TCEAL3Q969E4 200 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms