RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 A0A0A6YYK5 440 aaPredicted RBP8.71□□□□□ -1.02
CCL28-204ENST00000514421 KRBA1A5PL33 1030 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 FAM86C2PA6NEL3 165 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 LEFTY2O00292 366 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 MAN2B1O00754 1011 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 COCHO43405 550 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 FBXO21O94952 628 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 TBX18O95935 607 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 CCDC172P0C7W6 258 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 CYP11B1P15538 503 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 MAGEA1P43355 309 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 CLCN5P51795 746 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 SNX16P57768 344 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 STARD6P59095 220 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 YWHAGP61981 247 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCL28-204ENST00000514421 GFPT1Q06210 699 aaPredicted RBP8.71□□□□□ -1.02
CCL28-204ENST00000514421 TCEAL1Q15170 157 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 PDGFRLQ15198 375 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 ZNF77Q15935 545 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 C10orf120Q5SQS8 335 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 BTBD8Q5XKL5 378 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
CCL28-204ENST00000514421 TMEM110Q86TL2 294 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 SLC47A2Q86VL8 602 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 DDX42Q86XP3 938 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCL28-204ENST00000514421 ZNF677Q86XU0 584 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 FBXL6Q8N531 539 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 WDTC1Q8N5D0 677 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 CEP112Q8N8E3 955 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 IRGQQ8WZA9 623 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 MS4A3Q96HJ5 214 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 NOX5Q96PH1 765 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 SLC4A5Q9BY07 1137 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 PDCL3Q9H2J4 239 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 LINC00597Q9H2U6 94 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 DEF6Q9H4E7 631 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 C8orf33Q9H7E9 229 aaPredicted RBP8.71□□□□□ -1.02
CCL28-204ENST00000514421 ARHGEF3Q9NR81 526 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 ST7Q9NRC1 585 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 ABCC13Q9NSE7 274 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 OSER1Q9NX31 292 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 DNMT3LQ9UJW3 386 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 CA14Q9ULX7 337 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 CPQQ9Y646 472 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 DUSP10Q9Y6W6 482 aa8.71□□□□□ -1.02
CCL28-204ENST00000514421 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 E2F8A0AVK6 867 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 ARNTLO00327 626 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 SLC9A3R1O14745 358 aaPredicted RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 SART1O43290 800 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 PNMA6AP0CW24 399 aaPredicted RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 IFNAR2P48551 515 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 KPNA1P52294 538 aaPredicted RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 DAOAP59103 153 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 COG7P83436 770 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 ZXDBP98169 803 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 ADIGQ0VDE8 80 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 NR1H3Q13133 447 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 RUNX3Q13761 415 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 MLF2Q15773 248 aaPredicted RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 ITPRIPL2Q3MIP1 535 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 TDRD12Q587J7 1177 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 IER5LQ5T953 404 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 BSPRYQ5W0U4 402 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 C1orf228Q6PIY5 440 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 ZNF852Q6ZMS4 543 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 SUGP1Q8IWZ8 645 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 ADGRG2Q8IZP9 1017 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 TMEM35BQ8NCS4 154 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 TTC16Q8NEE8 873 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 RNF139Q8WU17 664 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 OSCP1Q8WVF1 389 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 UBE2Q2Q8WVN8 375 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 NDRG1Q92597 394 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 MSANTD3Q96H12 275 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 ZFYVE19Q96K21 471 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 CALR3Q96L12 384 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 DDX23Q9BUQ8 820 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 MIS12Q9H081 205 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 HEBP1Q9NRV9 189 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 OLA1Q9NTK5 396 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 DUS2Q9NX74 493 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 SMPD4Q9NXE4 827 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 CFAP97Q9P2B7 532 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 TBC1D14Q9P2M4 693 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 NUDT5Q9UKK9 219 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 MRPS17Q9Y2R5 130 aaKnown RBP8.7□□□□□ -1.02
CCL28-204ENST00000514421 SH3BP1Q9Y3L3 701 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 CEP83Q9Y592 693 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 TRIOO75962 3097 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 DENND4AQ7Z401 1863 aa8.7□□□□□ -1.02
CCL28-204ENST00000514421 YJEFN3A6XGL0 299 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 E7ENQ6 273 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 PIK3R2O00459 728 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 DDX3XO00571 662 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCL28-204ENST00000514421 PDGFBP01127 241 aaPredicted RBP8.69□□□□□ -1.02
CCL28-204ENST00000514421 H2AFXP16104 143 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms