RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 RSRC2Q7L4I2 434 aaKnown RBP8.57□□□□□ -1.04
NEDD4-210ENST00000513957 BHLHA9Q7RTU4 235 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 CACNA2D4Q7Z3S7 1137 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 SCD5Q86SK9 330 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 SLC47A2Q86VL8 602 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 CCDC105Q8IYK2 499 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 TMEM35BQ8NCS4 154 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 C1orf131Q8NDD1 294 aaKnown RBP8.57□□□□□ -1.04
NEDD4-210ENST00000513957 FLCNQ8NFG4 579 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 UBA3Q8TBC4 463 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 RNF139Q8WU17 664 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 FAM3CQ92520 227 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 CLDN23Q96B33 292 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 KLF16Q9BXK1 252 aaPredicted RBP8.57□□□□□ -1.04
NEDD4-210ENST00000513957 EDEM3Q9BZQ6 932 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 EBF3Q9H4W6 596 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 ECT2Q9H8V3 914 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 NMUR1Q9HB89 426 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 HPS4Q9NQG7 708 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 ST7Q9NRC1 585 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 GKN1Q9NS71 199 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 OSER1Q9NX31 292 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 CFAP97Q9P2B7 532 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 EGFL7Q9UHF1 273 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 AJAP1Q9UKB5 411 aaPredicted RBP8.57□□□□□ -1.04
NEDD4-210ENST00000513957 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 YJEFN3A6XGL0 299 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 E7ENQ6 273 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 TRDMT1O14717 391 aaKnown RBP8.56□□□□□ -1.04
NEDD4-210ENST00000513957 RECKO95980 971 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 LCP1P13796 627 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 DRD1P21728 446 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 CHKAP35790 457 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 HARS2P49590 506 aaKnown RBP8.56□□□□□ -1.04
NEDD4-210ENST00000513957 CDR2Q01850 454 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 APBA1Q02410 837 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 RING1Q06587 406 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 PPP2R5DQ14738 602 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 UBXN2BQ14CS0 331 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 EFHC1Q5JVL4 640 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 BSPRYQ5W0U4 402 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 ZNF397Q8NF99 534 aaPredicted RBP8.56□□□□□ -1.04
NEDD4-210ENST00000513957 ST13P5Q8NFI4 369 aaPredicted RBP8.56□□□□□ -1.04
NEDD4-210ENST00000513957 RIN3Q8TB24 985 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 DDX1Q92499 740 aaKnown RBP8.56□□□□□ -1.04
NEDD4-210ENST00000513957 ZFYVE19Q96K21 471 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 PPP1R13BQ96KQ4 1090 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 SERPINB11Q96P15 392 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 NUP58Q9BVL2 599 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
NEDD4-210ENST00000513957 PDCL3Q9H2J4 239 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 POPDC2Q9HBU9 364 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 SMPD4Q9NXE4 827 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 RRN3Q9NYV6 651 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 MARK1Q9P0L2 795 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 MARCH2Q9P0N8 246 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 DLGAP2Q9P1A6 1054 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 WNT6Q9Y6F9 365 aa8.56□□□□□ -1.04
NEDD4-210ENST00000513957 A0A1W2PQJ5 194 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 ANKRD62A6NC57 917 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 SHISA7A6NL88 538 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 FAM170BA6NMN3 283 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 E5RJQ4 531 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 HOXC11O43248 304 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 GREM1O60565 184 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 HSF2BPO75031 334 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 STC2O76061 302 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 PDGFBP01127 241 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 CYP17A1P05093 508 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 FERP16591 822 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 TARSP26639 723 aaKnown RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 GJA4P35212 333 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 GABRB2P47870 512 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 PGFP49763 221 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 RGS7P49802 495 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 PTPN5P54829 565 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 VCPP55072 806 aaKnown RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 GSCP56915 257 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 YWHAZP63104 245 aaKnown RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 GAD2Q05329 585 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 TNK2Q07912 1038 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 GRSF1Q12849 480 aaKnown RBP eCLIP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 CCINQ13939 588 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 NR1I3Q14994 352 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 E2F5Q15329 346 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 NR6A1Q15406 480 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 TRIP4Q15650 581 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 TMEM196Q5HYL7 178 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 ACBD5Q5T8D3 534 aaPredicted RBP8.55□□□□□ -1.04
NEDD4-210ENST00000513957 NUGGCQ68CJ6 796 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 TRIM68Q6AZZ1 485 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 DENND1BQ6P3S1 775 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 Q6ZNB5 142 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 SLC26A9Q7LBE3 791 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 ARCQ7LC44 396 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 LUZP1Q86V48 1076 aa8.55□□□□□ -1.04
NEDD4-210ENST00000513957 UNC45BQ8IWX7 931 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms