RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 ABCC13Q9NSE7 274 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 CALCOCO1Q9P1Z2 691 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 DNMT3LQ9UJW3 386 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 NENFQ9UMX5 172 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 MYO10Q9HD67 2058 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 AKR1B10O60218 316 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 ECI2O75521 394 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 STC2O76061 302 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 CALB1P05937 261 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 SULT1E1P49888 294 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 ATXN1P54253 815 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 VCPP55072 806 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 RPL7AP62424 266 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 YWHAZP63104 245 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 TNK2Q07912 1038 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 CDO1Q16878 200 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 ASTE1Q2TB18 679 aaPredicted RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 MSANTD2Q6P1R3 559 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 ALKBH5Q6P6C2 394 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 VPS36Q86VN1 386 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 BBS7Q8IWZ6 715 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 YAF2Q8IY57 180 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 SLC44A3Q8N4M1 653 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 BPIFB1Q8TDL5 484 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 CFAP57Q96MR6 1250 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 MCEEQ96PE7 176 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 TBCBQ99426 244 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 SELENOOQ9BVL4 669 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 KLF16Q9BXK1 252 aaPredicted RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 THAP2Q9H0W7 228 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 KIF9Q9HAQ2 790 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 CNOT8Q9UFF9 292 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 TFR2Q9UP52 801 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 SH3BP1Q9Y3L3 701 aa10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 BZW2Q9Y6E2 419 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-209ENST00000513818 SSU72P8A0A1W2PR75 194 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 TCRBV5S1A1TA0A578 114 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 ZNF263O14978 683 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 RTN2O75298 545 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 TRUB2O95900 331 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 MOCS2O96007 188 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 KLKB1P03952 638 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 PSMC3P17980 439 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 CORO1AP31146 461 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 RFC1P35251 1148 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 GGCXP38435 758 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 SOX9P48436 509 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 MRE11P49959 708 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 SNX16P57768 344 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 GPC5P78333 572 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 ATP11AP98196 1134 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 OGDHQ02218 1023 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 NME3Q13232 169 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 TDGQ13569 410 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 ZNF268Q14587 947 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 SLC18A3Q16572 532 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 C15orf59Q2T9L4 293 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 EFHC1Q5JVL4 640 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 SH3PXD2AQ5TCZ1 1133 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 RAD9BQ6WBX8 426 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 TADA2BQ86TJ2 420 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 ZDHHC17Q8IUH5 632 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 TMEM139Q8IV31 216 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 MFSD6LQ8IWD5 586 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 C3orf20Q8ND61 904 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 RXFP2Q8WXD0 754 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 POM121Q96HA1 1249 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 CCDC42Q96M95 316 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 PANX2Q96RD6 677 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 TRMT61BQ9BVS5 477 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 COL25A1Q9BXS0 654 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 ISCUQ9H1K1 167 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 EBF3Q9H4W6 596 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 BRD9Q9H8M2 597 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 SCUBE2Q9NQ36 999 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 OLA1Q9NTK5 396 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 DDIT4Q9NX09 232 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 IGSF9Q9P2J2 1179 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 XPO7Q9UIA9 1087 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 ZMYM5Q9UJ78 669 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 TMEM59LQ9UK28 342 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 STRIP2Q9ULQ0 834 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 CA14Q9ULX7 337 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 DUSP12Q9UNI6 340 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 SORCS3Q9UPU3 1222 aa10.22□□□□□ -0.77
TOPBP1-209ENST00000513818 M0QYT0 321 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 IRAK2O43187 625 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 CCP110O43303 1012 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 GREM1O60565 184 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 IGLV3-25P01717 112 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 GLI1P08151 1106 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 KRT3P12035 628 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 GZMAP12544 262 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 PFKLP17858 780 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms