RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 GSRP00390 522 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 VDRP11473 427 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 STAT5BP51692 787 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 CDH8P55286 799 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 BCAR1P56945 870 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 RPL26P61254 145 aaKnown RBP11.97□□□□□ -0.49
SNX25-205ENST00000512853 XIAPP98170 497 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 CXCL9Q07325 125 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 ORC1Q13415 861 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 MXD4Q14582 209 aaPredicted RBP11.97□□□□□ -0.49
SNX25-205ENST00000512853 RAB6CQ53S08 254 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 EFHC1Q5JVL4 640 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 TEDDM1Q5T9Z0 273 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 SH3PXD2AQ5TCZ1 1133 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 MBLAC2Q68D91 279 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 TRMT10BQ6PF06 316 aaKnown RBP11.97□□□□□ -0.49
SNX25-205ENST00000512853 FAM183BPQ6ZVS7 135 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 CYS1Q717R9 158 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 MARK2Q7KZI7 788 aaKnown RBP11.97□□□□□ -0.49
SNX25-205ENST00000512853 ADGRF2Q8IZF7 708 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 TTLL6Q8N841 843 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 C1orf127Q8N9H9 656 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 FAM172AQ8WUF8 416 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 EBF4Q9BQW3 602 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 MIS12Q9H081 205 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 RAB6CQ9H0N0 254 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 ITGA11Q9UKX5 1188 aa11.97□□□□□ -0.49
SNX25-205ENST00000512853 IGKV6-21A0A0C4DH24 114 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 MEI4A8MW99 385 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 USP1O94782 785 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 KLHL2O95198 593 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 APBA3O96018 575 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 APRTP07741 180 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 C6orf222P0C671 652 aaPredicted RBP11.96□□□□□ -0.49
SNX25-205ENST00000512853 KITP10721 976 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 ALOX15P16050 662 aaPredicted RBP11.96□□□□□ -0.49
SNX25-205ENST00000512853 CDK7P50613 346 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 ZNF280AP59817 542 aaPredicted RBP11.96□□□□□ -0.49
SNX25-205ENST00000512853 HIC1Q14526 733 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 C15orf59Q2T9L4 293 aaPredicted RBP11.96□□□□□ -0.49
SNX25-205ENST00000512853 BOLA3Q53S33 107 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 ATF7IP2Q5U623 682 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 EEF1DP3Q658K8 133 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 DHDDSQ86SQ9 333 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 PDSS2Q86YH6 399 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 CCNJLQ8IV13 435 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 RNF149Q8NC42 400 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 PCDH19Q8TAB3 1148 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 JADE3Q92613 823 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 RILPQ96NA2 401 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 TBCBQ99426 244 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 ZNF670Q9BS34 389 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 CDT1Q9H211 546 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 FZD8Q9H461 694 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 FAM96AQ9H5X1 160 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 GBA2Q9HCG7 927 aaPredicted RBP11.96□□□□□ -0.49
SNX25-205ENST00000512853 STK32BQ9NY57 414 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 EMCNQ9ULC0 261 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 AFG3L2Q9Y4W6 797 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 SLC4A7Q9Y6M7 1214 aa11.96□□□□□ -0.49
SNX25-205ENST00000512853 TNS1Q9HBL0 1735 aaKnown RBP11.96□□□□□ -0.49
SNX25-205ENST00000512853 ACKR2O00590 384 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 GLRA3O75311 464 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 GCATO75600 419 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 RTN3O95197 1032 aaPredicted RBP11.96□□□□□ -0.5
SNX25-205ENST00000512853 NFICP08651 508 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 FGF3P11487 239 aaPredicted RBP11.96□□□□□ -0.5
SNX25-205ENST00000512853 MYL4P12829 197 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 PDGFRAP16234 1089 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 CYP3A5P20815 502 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 ATICP31939 592 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 PDE1BQ01064 536 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 FSTL1Q12841 308 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 FASTKD1Q53R41 847 aaKnown RBP11.96□□□□□ -0.5
SNX25-205ENST00000512853 PGM2L1Q6PCE3 622 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 RAPH1Q70E73 1250 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 WDR75Q8IWA0 830 aaKnown RBP11.96□□□□□ -0.5
SNX25-205ENST00000512853 MPP5Q8N3R9 675 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 OR6Y1Q8NGX8 325 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.96□□□□□ -0.5
SNX25-205ENST00000512853 DEPDC1BQ8WUY9 529 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 TTC1Q99614 292 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 GCOM2Q9BZD3 368 aaPredicted RBP11.96□□□□□ -0.5
SNX25-205ENST00000512853 RPF1Q9H9Y2 349 aaKnown RBP11.96□□□□□ -0.5
SNX25-205ENST00000512853 DNAJC28Q9NX36 388 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 MOCS1Q9NZB8 636 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 DNAJC16Q9Y2G8 782 aa11.96□□□□□ -0.5
SNX25-205ENST00000512853 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.55e-10■■■■■ 120.6
SNX25-205ENST00000512853 C19orf81C9J6K1 198 aa11.95□□□□□ -0.5
SNX25-205ENST00000512853 MDM4O15151 490 aa11.95□□□□□ -0.5
SNX25-205ENST00000512853 AP1G2O75843 785 aa11.95□□□□□ -0.5
SNX25-205ENST00000512853 ALDH1A2O94788 518 aa11.95□□□□□ -0.5
SNX25-205ENST00000512853 TOMM70O94826 608 aa11.95□□□□□ -0.5
SNX25-205ENST00000512853 KRT19P08727 400 aa11.95□□□□□ -0.5
SNX25-205ENST00000512853 SRGAP2CP0DJJ0 459 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms