RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PGAM1P18669 254 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ALDH7A1P49419 539 aaKnown RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 NCKAP1LP55160 1127 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 NCALDP61601 193 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 GALNTL6Q49A17 601 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 PRMT9Q6P2P2 845 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 NT5DC4Q86YG4 428 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 HDAC7Q8WUI4 952 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 PRDM16Q9HAZ2 1276 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 TMEM51Q9NW97 253 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 FAM153AQ9UHL3 310 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 POLG2Q9UHN1 485 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ZSCAN5CA6NGD5 496 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 MAP3K13O43283 966 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 IFNA14P01570 189 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 FAM153BP0C7A2 387 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 EIF4BP23588 611 aaKnown RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 CD151P48509 253 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 SLC1A6P48664 564 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 CDK7P50613 346 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 UBE3AQ05086 875 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 FAM153CQ494X1 144 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 SPANXN3Q5MJ09 141 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 N4BP2L1Q5TBK1 243 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 OTOAQ7RTW8 1153 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 EMILIN2Q9BXX0 1053 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ADGRE3Q9BY15 652 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 HACD1B0YJ81 288 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 FCHO1O14526 889 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 TRDMT1O14717 391 aaKnown RBP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 NKRFO15226 690 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 HOXA2O43364 376 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 DDHD2O94830 711 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 CXCL8P10145 99 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 SLC34A1Q06495 639 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 CSHL1Q14406 222 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 TAF2Q6P1X5 1199 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 MIB1Q86YT6 1006 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 DEFB107AQ8IZN7 70 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 LRRC39Q96DD0 335 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 PPP1R10Q96QC0 940 aaKnown RBP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 KIAA1683Q9H0B3 1180 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 GPRC5DQ9NZD1 345 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 RNF103O00237 685 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 IMPDH2P12268 514 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 ALADP13716 330 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 RRM2P31350 389 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 THPOP40225 353 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 TKTL1P51854 596 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 APOL2Q9BQE5 337 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 TSPAN16Q9UKR8 245 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 SIK3Q9Y2K2 1263 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 CAB39Q9Y376 341 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 A0A087WZ62 844 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 NR5A2O00482 541 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 MAP2K7O14733 419 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 CRABP2P29373 138 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 OAZ1P54368 228 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 MAP3K7CLP57077 242 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 AGKQ53H12 422 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 PLEKHH3Q7Z736 793 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 KATNAL2Q8IYT4 538 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 ZCCHC9Q8N567 271 aaKnown RBP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 HTR3CQ8WXA8 447 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 CASP10Q92851 521 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 CENPTQ96BT3 561 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 FDXACB1Q9BRP7 624 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 TMCC3Q9ULS5 477 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 ANKRD6Q9Y2G4 727 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 PLA2G6O60733 806 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 RASSF9O75901 435 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 VTNP04004 478 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 TMEM132BQ14DG7 1078 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 LZTR1Q8N653 840 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 RSPH1Q8WYR4 309 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-210ENST00000512756 CPNE1Q99829 537 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 BBS2Q9BXC9 721 aa12.81□□□□□ -0.36
COL11A1-210ENST00000512756 GUCA1CO95843 209 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 LRG1P02750 347 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 CYP3A4P08684 503 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 ZNF135P52742 658 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 OASLQ15646 514 aaKnown RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 MFSD7Q6UXD7 560 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 MAP4K3Q8IVH8 894 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 SRPK1Q96SB4 655 aaKnown RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms