RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PRKAB2O43741 272 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 JAK2O60674 1132 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 GRAP2O75791 330 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 TOP3BO95985 862 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 GJA1P17302 382 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 IFNGR2P38484 337 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 LHX1P48742 406 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 MTTPP55157 894 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 AP1S2P56377 157 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 GALNTL6Q49A17 601 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 USP45Q70EL2 814 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 CKAP2Q8WWK9 683 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 PRMT6Q96LA8 375 aaPredicted RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 CAPS2Q9BXY5 557 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 TMEM60Q9H2L4 133 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 MRM3Q9HC36 420 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 ZNF214Q9UL59 606 aaPredicted RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 CNTNAP2Q9UHC6 1331 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 LRRC72A6NJI9 287 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CCNDBP1O95273 360 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CLK1P49759 484 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 CCNIQ14094 377 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CYTH1Q15438 398 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 ZNF658Q5TYW1 1059 aaPredicted RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 REM2Q8IYK8 340 aaPredicted RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 ADGRF2Q8IZF7 708 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CDYL2Q8N8U2 506 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 UBA3Q8TBC4 463 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.17□□□□□ -0.94
VCAN-208ENST00000512590 THOC1Q96FV9 657 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 MRPL1Q9BYD6 325 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 SH3GLB2Q9NR46 395 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 MAT2BQ9NZL9 334 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 GAKO14976 1311 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 GYG2O15488 501 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 EIF3BP55884 814 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 STX12Q86Y82 276 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 RHOT1Q8IXI2 618 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 PEX5LQ8IYB4 626 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CYGBQ8WWM9 190 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 OR8D1Q8WZ84 308 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 KAT2BQ92831 832 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 PGLYRP2Q96PD5 576 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 SLC38A3Q99624 504 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 EPB41L5Q9HCM4 733 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 XPO7Q9UIA9 1087 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 DUSP12Q9UNI6 340 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CDYLQ9Y232 598 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 V9GYQ6 96 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CCRL2O00421 344 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 NR3C2P08235 984 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 ACAT1P24752 427 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 MECP2P51608 486 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 HSDL1Q3SXM5 330 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 THOC7Q6I9Y2 204 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 TSPYL6Q8N831 410 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 HPDLQ96IR7 371 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 PANX2Q96RD6 677 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 FBXO44Q9H4M3 255 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 AOX1Q06278 1338 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 A0A087WUV0 522 aaPredicted RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 SLC28A1O00337 649 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 PHF2O75151 1096 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 NOL4O94818 638 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 DDNO94850 711 aaPredicted RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 VIPP01282 170 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 MMEP08473 750 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 NR2F1P10589 423 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 TYMPP19971 482 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 ME2P23368 584 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 ACOT2P49753 483 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 DEFA1P59665 94 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 DEFA3P59666 94 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CAV1Q03135 178 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 PROSER1Q86XN7 944 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CBWD2Q8IUF1 395 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 SMG7Q92540 1137 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 TIPINQ9BVW5 301 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 AP1M1Q9BXS5 423 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 DCTPP1Q9H773 170 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 IL1RL2Q9HB29 575 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 ATP13A1Q9HD20 1204 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 POLG2Q9UHN1 485 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 MGAT4AQ9UM21 535 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.17□□□□□ -0.94
VCAN-208ENST00000512590 PPP2R2CQ9Y2T4 447 aa9.17□□□□□ -0.94
VCAN-208ENST00000512590 CDK13Q14004 1512 aaKnown RBP9.17□□□□□ -0.94
VCAN-208ENST00000512590 PIPSLA2A3N6 862 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 PLA2G6O60733 806 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 DNASE1L1P49184 302 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 RAB2AP61019 212 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 PLIN5Q00G26 463 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 GFPT1Q06210 699 aaPredicted RBP9.16□□□□□ -0.94
VCAN-208ENST00000512590 MTAPQ13126 283 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 LRRC32Q14392 662 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 CNGA3Q16281 694 aa9.16□□□□□ -0.94
VCAN-208ENST00000512590 GJC2Q5T442 439 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms