RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 KIAA0754O94854 1291 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 AGTP01019 485 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 SRGAP2BP0DMP2 458 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 ARF4P18085 180 aaPredicted RBP9.91□□□□□ -0.82
MSH3-203ENST00000512531 DNAJB1P25685 340 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 ECHS1P30084 290 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 PPP2R2AP63151 447 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 SIGLEC14Q08ET2 396 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 TFDP2Q14188 446 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 ZNF394Q53GI3 561 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 DDX42Q86XP3 938 aaKnown RBP eCLIP9.91□□□□□ -0.82
MSH3-203ENST00000512531 SUGP1Q8IWZ8 645 aaKnown RBP9.91□□□□□ -0.82
MSH3-203ENST00000512531 RIBC1Q8N443 379 aaPredicted RBP9.91□□□□□ -0.82
MSH3-203ENST00000512531 FBXL6Q8N531 539 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 ZDHHC1Q8WTX9 485 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
MSH3-203ENST00000512531 SUSD6Q92537 303 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 HAUS1Q96CS2 278 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 PGM2Q96G03 612 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 TMEM109Q9BVC6 243 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 NSRP1Q9H0G5 558 aaKnown RBP9.91□□□□□ -0.82
MSH3-203ENST00000512531 XYLT2Q9H1B5 865 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 PLEKHA4Q9H4M7 779 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 IGFLR1Q9H665 355 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 UBQLN1Q9UMX0 589 aaKnown RBP9.91□□□□□ -0.82
MSH3-203ENST00000512531 AGAP1Q9UPQ3 857 aa9.91□□□□□ -0.82
MSH3-203ENST00000512531 M0QYV0 167 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 NDUFAB1O14561 156 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 RASGRF2O14827 1237 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 B4GALT5O43286 388 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 NDUFB5O43674 189 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 TSPAN1O60635 241 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 CILPO75339 1184 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 GLP2RO95838 553 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 VTNP04004 478 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 ERBB2P04626 1255 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 NFICP08651 508 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 FAM163BP0C2L3 166 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 RALAP11233 206 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 GJC1P36383 396 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 MDH1P40925 334 aaKnown RBP9.9□□□□□ -0.82
MSH3-203ENST00000512531 ACADSBP45954 432 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 RPL21P46778 160 aaKnown RBP9.9□□□□□ -0.82
MSH3-203ENST00000512531 NRIP1P48552 1158 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 MARCKSL1P49006 195 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 IRAK1P51617 712 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 GYS2P54840 703 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 FAM189BP81408 668 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 PLCB3Q01970 1234 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 ZNF844Q08AG5 666 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 INCA1Q0VD86 236 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 EEF1DP3Q658K8 133 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 C4orf22Q6V702 233 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 PPP1R21Q6ZMI0 780 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 C1orf127Q8N9H9 656 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 FBXO25Q8TCJ0 367 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 BCAS4Q8TDM0 211 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.9□□□□□ -0.82
MSH3-203ENST00000512531 P3H4Q92791 437 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 CFAP57Q96MR6 1250 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 SERPINB12Q96P63 405 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 PHACTR1Q9C0D0 580 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 EPN3Q9H201 632 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 ELAC1Q9H777 363 aaKnown RBP9.9□□□□□ -0.82
MSH3-203ENST00000512531 TLE6Q9H808 572 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 RSAD1Q9HA92 442 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 PRDM16Q9HAZ2 1276 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 ERVK-5Q9HDB9 667 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 RGS18Q9NS28 235 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 ZDHHC18Q9NUE0 388 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 ZNF148Q9UQR1 794 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 USP15Q9Y4E8 981 aaPredicted RBP9.9□□□□□ -0.82
MSH3-203ENST00000512531 PCDHB7Q9Y5E2 793 aa9.9□□□□□ -0.82
MSH3-203ENST00000512531 EVPLQ92817 2033 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 ARHGEF37A1IGU5 675 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 LRRD1A4D1F6 860 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 C9IYK1 514 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 MCF2LO15068 1137 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 PRPSAP2O60256 369 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 MICAL2O94851 1124 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 EDN1P05305 212 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 ITGAVP06756 1048 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 HOXB8P17481 243 aaPredicted RBP9.89□□□□□ -0.83
MSH3-203ENST00000512531 CYP3A5P20815 502 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 GPD1P21695 349 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 PAX3P23760 479 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 HPDP32754 393 aaPredicted RBP9.89□□□□□ -0.83
MSH3-203ENST00000512531 PHBP35232 272 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 PCK1P35558 622 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 GABRB2P47870 512 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 RAD23BP54727 409 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 SNX1Q13596 522 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 KCNC3Q14003 757 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 STAT4Q14765 748 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 MORF4L2Q15014 288 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 DUSP6Q16828 381 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 SV2CQ496J9 727 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 BOLA3Q53S33 107 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 TTMPQ5BVD1 217 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms