RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 KIAA0391O15091 583 aaKnown RBP12.22□□□□□ -0.45
RNF4-216ENST00000511859 TLR5O60602 858 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 RFPL3O75679 317 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 PRPF6O94906 941 aaKnown RBP12.22□□□□□ -0.45
RNF4-216ENST00000511859 LDOC1O95751 146 aaPredicted RBP12.22□□□□□ -0.45
RNF4-216ENST00000511859 ACTN2P35609 894 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 CDH8P55286 799 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 CXADRP78310 365 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 TLE3Q04726 772 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 CACTIN-AS1Q8N1I8 211 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 SNX19Q92543 992 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 FAM84AQ96KN4 292 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 MRPL45Q9BRJ2 306 aaKnown RBP12.22□□□□□ -0.45
RNF4-216ENST00000511859 B3GNT5Q9BYG0 378 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 TM9SF3Q9HD45 589 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.22□□□□□ -0.45
RNF4-216ENST00000511859 CLDN5O00501 218 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 ATP5C1P36542 298 aaKnown RBP12.21□□□□□ -0.45
RNF4-216ENST00000511859 CTSKP43235 329 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 COPAP53621 1224 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 SLC5A3P53794 718 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 PKDCCQ504Y2 493 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 SFR1Q86XK3 245 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 SYCP3Q8IZU3 236 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 GPD1LQ8N335 351 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 OR5B17Q8NGF7 314 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 RASSF8Q8NHQ8 419 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 FBXO44Q9H4M3 255 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 C6orf106Q9H6K1 298 aaPredicted RBP12.21□□□□□ -0.45
RNF4-216ENST00000511859 TLR8Q9NR97 1041 aaKnown RBP12.21□□□□□ -0.45
RNF4-216ENST00000511859 DNMT3LQ9UJW3 386 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 NME7Q9Y5B8 376 aa12.21□□□□□ -0.45
RNF4-216ENST00000511859 ATP8B3O60423 1300 aa12.21□□□□□ -0.46
RNF4-216ENST00000511859 PTPRJQ12913 1337 aa12.21□□□□□ -0.46
RNF4-216ENST00000511859 A0A1B0GTQ1 180 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 ZNF233A6NK53 670 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 A8MXQ7 604 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 TIMM44O43615 452 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 TSPAN3O60637 253 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 C7P10643 843 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 GAP43P17677 238 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 CD27P26842 260 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 ACSL1P33121 698 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 PLA2G4AP47712 749 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 MFAP3P55082 362 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 KCNH2Q12809 1159 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 ALCAMQ13740 583 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 HES3Q5TGS1 186 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 FBXL19Q6PCT2 694 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 ADAT2Q7Z6V5 191 aaKnown RBP12.2□□□□□ -0.46
RNF4-216ENST00000511859 FAM124AQ86V42 546 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 SPACA3Q8IXA5 215 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 FAM181AQ8N9Y4 354 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 NOC3LQ8WTT2 800 aaKnown RBP12.2□□□□□ -0.46
RNF4-216ENST00000511859 SKA1Q96BD8 255 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 BIRC7Q96CA5 298 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 CNDP2Q96KP4 475 aaKnown RBP12.2□□□□□ -0.46
RNF4-216ENST00000511859 ZSCAN31Q96LW9 406 aaPredicted RBP12.2□□□□□ -0.46
RNF4-216ENST00000511859 CBWD1Q9BRT8 395 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 DPEP3Q9H4B8 488 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 PCIF1Q9H4Z3 704 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 DMAP1Q9NPF5 467 aaPredicted RBP12.2□□□□□ -0.46
RNF4-216ENST00000511859 CYLDQ9NQC7 956 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 ELOVL2Q9NXB9 296 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 PLK2Q9NYY3 685 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 ZNF510Q9Y2H8 683 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 SLCO1B1Q9Y6L6 691 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 AHCTF1Q8WYP5 2266 aa12.2□□□□□ -0.46
RNF4-216ENST00000511859 TP53BP1Q12888 1972 aaPredicted RBP12.2□□□□□ -0.46
RNF4-216ENST00000511859 BRINP1O60477 761 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 WISP1O95388 367 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 GCNT3O95395 438 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 TBX18O95935 607 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 CST3P01034 146 aaPredicted RBP12.19□□□□□ -0.46
RNF4-216ENST00000511859 EPHX1P07099 455 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 C6P13671 934 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 CHKAP35790 457 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 LONP1P36776 959 aaKnown RBP12.19□□□□□ -0.46
RNF4-216ENST00000511859 UCNP55089 124 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 C21orf59P57076 290 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 TNNC1P63316 161 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 CCDC173Q0VFZ6 552 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 ILKQ13418 452 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 ZNF234Q14588 700 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 EIF4HQ15056 248 aaKnown RBP12.19□□□□□ -0.46
RNF4-216ENST00000511859 GEN1Q17RS7 908 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 TBC1D25Q3MII6 688 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 WDR72Q3MJ13 1102 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 KLHDC10Q6PID8 442 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 USP49Q70CQ1 688 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 TRAPPC11Q7Z392 1133 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 LURAP1LQ8IV03 231 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 ZNF248Q8NDW4 579 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 OR2T3Q8NH03 318 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 BHMTQ93088 406 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms