RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 NMUR1Q9HB89 426 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 PNPLA8Q9NP80 782 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
DDX41-211ENST00000510171 DMAC2Q9NW81 257 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 USP36Q9P275 1121 aaKnown RBP10.96□□□□□ -0.65
DDX41-211ENST00000510171 THAP10Q9P2Z0 257 aaPredicted RBP10.96□□□□□ -0.65
DDX41-211ENST00000510171 HMGXB4Q9UGU5 601 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 NAGPAQ9UK23 515 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 PCOLCE2Q9UKZ9 415 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 CFAP45Q9UL16 551 aa10.96□□□□□ -0.65
DDX41-211ENST00000510171 LAMA1P25391 3075 aa10.96□□□□□ -0.66
DDX41-211ENST00000510171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 METTL12A8MUP2 240 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 BCAT2O15382 392 aaPredicted RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 CBFA2T3O75081 653 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 STC2O76061 302 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 PENKP01210 267 aaPredicted RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 KLKB1P03952 638 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 RALAP11233 206 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 CHKAP35790 457 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 MATKP42679 507 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 AFMP43652 599 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 ME1P48163 572 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 PSEN1P49768 467 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 TPMTP51580 245 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 MFAP3P55082 362 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 DLG4P78352 724 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 COG7P83436 770 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 CUL4BQ13620 913 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 DCAF12L1Q5VU92 463 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 SPOPLQ6IQ16 392 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 IL27RAQ6UWB1 636 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 CLEC20AQ6ZU45 233 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 SV2AQ7L0J3 742 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 SLCO6A1Q86UG4 719 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 TMPRSS6Q8IU80 811 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 ZCCHC9Q8N567 271 aaKnown RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 TMC2Q8TDI7 906 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 TMEM174Q8WUU8 243 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 SIPA1Q96FS4 1042 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 CDK5RAP1Q96SZ6 601 aaKnown RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 NUP58Q9BVL2 599 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 MKRN2Q9H000 416 aaKnown RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 GAREM1Q9H706 876 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 IL21RQ9HBE5 538 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 FAM13BQ9NYF5 915 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 KIAA1522Q9P206 1035 aaPredicted RBP10.95□□□□□ -0.66
DDX41-211ENST00000510171 NUP205Q92621 2012 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 ANAPC1Q9H1A4 1944 aa10.95□□□□□ -0.66
DDX41-211ENST00000510171 KCNJ18B7U540 433 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 IKBKBO14920 756 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 TIMM44O43615 452 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 KIF20AO95235 890 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 CER1O95813 267 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ASS1P00966 412 aaKnown RBP10.94□□□□□ -0.66
DDX41-211ENST00000510171 CYBBP04839 570 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ZNF883P0CG24 379 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ACADMP11310 421 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 CORO1AP31146 461 aaKnown RBP10.94□□□□□ -0.66
DDX41-211ENST00000510171 PIK3CAP42336 1068 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 IL12RB1P42701 662 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ASPAP45381 313 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 KIF11P52732 1056 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ENPP2Q13822 863 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 GEN1Q17RS7 908 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 COL28A1Q2UY09 1125 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 HLA-BQ31612 363 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
DDX41-211ENST00000510171 FYB2Q5VWT5 728 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 SCD5Q86SK9 330 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 PDZD3Q86UT5 571 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ZNF276Q8N554 614 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
DDX41-211ENST00000510171 P2RY11Q96G91 374 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 CDC6Q99741 560 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 NT5C1AQ9BXI3 368 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 DCLK3Q9C098 648 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 DNAI2Q9GZS0 605 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 CYP3A43Q9HB55 503 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 TM7SF3Q9NS93 570 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ELOVL2Q9NXB9 296 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 CLIC5Q9NZA1 410 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 RASAL2Q9UJF2 1139 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 FRMD4BQ9Y2L6 1034 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ASCC3Q8N3C0 2202 aaKnown RBP10.94□□□□□ -0.66
DDX41-211ENST00000510171 IGF2RP11717 2491 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 ATRXP46100 2492 aa10.94□□□□□ -0.66
DDX41-211ENST00000510171 KIAA1549LQ6ZVL6 1849 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 CILPO75339 1184 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 IGLV3-19P01714 112 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 HLA-DRAP01903 254 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 NR3C1P04150 777 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 HMBSP08397 361 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 ARID5AQ03989 594 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 INCA1Q0VD86 236 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 STK4Q13043 487 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 ZNF234Q14588 700 aa10.93□□□□□ -0.66
DDX41-211ENST00000510171 SUZ12Q15022 739 aaKnown RBP10.93□□□□□ -0.66
DDX41-211ENST00000510171 EIF4HQ15056 248 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms