RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
SNF8-206ENST00000509989 IRGQQ8WZA9 623 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 MSANTD3Q96H12 275 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 FAM81BQ96LP2 452 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 ERGIC2Q96RQ1 377 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 PCDHB18PQ96TA0 734 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
SNF8-206ENST00000509989 PRMT8Q9NR22 394 aaPredicted RBP14.18□□□□□ -0.14
SNF8-206ENST00000509989 ABCC13Q9NSE7 274 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 TBC1D14Q9P2M4 693 aa14.18□□□□□ -0.14
SNF8-206ENST00000509989 XPO7Q9UIA9 1087 aaKnown RBP14.18□□□□□ -0.14
SNF8-206ENST00000509989 ARIH1Q9Y4X5 557 aaPredicted RBP14.18□□□□□ -0.14
SNF8-206ENST00000509989 ZFHX2Q9C0A1 2572 aaPredicted RBP14.17□□□□□ -0.14
SNF8-206ENST00000509989 K7ESF4 209 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 SLC9A3R1O14745 358 aaPredicted RBP14.17□□□□□ -0.14
SNF8-206ENST00000509989 NCAM2O15394 837 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 LAMTOR5O43504 91 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 TSPAN3O60637 253 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 TULP3O75386 442 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 TFE3P19532 575 aaPredicted RBP14.17□□□□□ -0.14
SNF8-206ENST00000509989 PXNP49023 591 aaPredicted RBP14.17□□□□□ -0.14
SNF8-206ENST00000509989 NUBP1P53384 320 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 TRIP4Q15650 581 aaPredicted RBP14.17□□□□□ -0.14
SNF8-206ENST00000509989 NFKBIBQ15653 356 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 E4F1Q66K89 784 aaPredicted RBP14.17□□□□□ -0.14
SNF8-206ENST00000509989 PHLDB2Q86SQ0 1253 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 TAC4Q86UU9 113 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 RPLP0P6Q8NHW5 317 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 STK32AQ8WU08 396 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 FAM149B1Q96BN6 582 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 ERLEC1Q96DZ1 483 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 FAM122AQ96E09 287 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 PPP1R13BQ96KQ4 1090 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 PCMTD1Q96MG8 357 aaPredicted RBP14.17□□□□□ -0.14
SNF8-206ENST00000509989 LHX5Q9H2C1 402 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 CALCOCO1Q9P1Z2 691 aa14.17□□□□□ -0.14
SNF8-206ENST00000509989 USP34Q70CQ2 3546 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 WDR87Q6ZQQ6 2873 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 NEDD8-MDP1E9PL57 170 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 HOXC11O43248 304 aaPredicted RBP14.16□□□□□ -0.14
SNF8-206ENST00000509989 IGLV3-27P01718 113 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 NCAM1P13591 858 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 TYRP14679 529 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 SLC6A4P31645 630 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 KRT9P35527 623 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 SOX5P35711 763 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 FMO1Q01740 532 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 GAD2Q05329 585 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 GRSF1Q12849 480 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNF8-206ENST00000509989 NR1H3Q13133 447 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 SRSF5Q13243 272 aaKnown RBP14.16□□□□□ -0.14
SNF8-206ENST00000509989 LRRC32Q14392 662 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 MEA1Q16626 185 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 C2orf27AQ580R0 203 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 DGKKQ5KSL6 1271 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 OTUD1Q5VV17 481 aaPredicted RBP14.16□□□□□ -0.14
SNF8-206ENST00000509989 FYB2Q5VWT5 728 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 NADSYN1Q6IA69 706 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 TRNP1Q6NT89 227 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 OLFML1Q6UWY5 402 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 ALYREFQ86V81 257 aaKnown RBP14.16□□□□□ -0.14
SNF8-206ENST00000509989 DEFB106AQ8N104 65 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 KIAA1958Q8N8K9 716 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 RNF139Q8WU17 664 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 CPA5Q8WXQ8 436 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 FCRL2Q96LA5 508 aaPredicted RBP14.16□□□□□ -0.14
SNF8-206ENST00000509989 PRRX2Q99811 253 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 BBS2Q9BXC9 721 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 NAT10Q9H0A0 1025 aaKnown RBP14.16□□□□□ -0.14
SNF8-206ENST00000509989 LSM7Q9UK45 103 aaKnown RBP14.16□□□□□ -0.14
SNF8-206ENST00000509989 SDK1Q7Z5N4 2213 aa14.16□□□□□ -0.14
SNF8-206ENST00000509989 A0A1B0GTH6 734 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 SMTNL1A8MU46 457 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 PRRT4C9JH25 899 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 GFRA2O00451 464 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 FBXO21O94952 628 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 KAT7O95251 611 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 GJB6O95452 261 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 ADH1CP00326 375 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 CISD3P0C7P0 127 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 CDH5P33151 784 aaPredicted RBP14.15□□□□□ -0.14
SNF8-206ENST00000509989 ACADSBP45954 432 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 NOMO3P69849 1222 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 COG7P83436 770 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 ARID5AQ03989 594 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 RAB6CQ53S08 254 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 NAA35Q5VZE5 725 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 HEATR6Q6AI08 1181 aaKnown RBP14.15□□□□□ -0.14
SNF8-206ENST00000509989 RFWD3Q6PCD5 774 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 ASCL5Q7RTU5 278 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 DNAAF5Q86Y56 855 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 SPEM1Q8N4L4 309 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 CCDC33Q8N5R6 958 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 NEK11Q8NG66 645 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 BAP1Q92560 729 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 NELL1Q92832 810 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 OTUB2Q96DC9 234 aa14.15□□□□□ -0.14
SNF8-206ENST00000509989 PNKPQ96T60 521 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms