RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 DGKGP49619 791 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 VAMP7P51809 220 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 MFAP3P55082 362 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 MCCD1P59942 119 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-202ENST00000509637 BYSLQ13895 437 aaKnown RBP16.75■□□□□ 0.27
RAB40C-202ENST00000509637 C10orf120Q5SQS8 335 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 KLHDC10Q6PID8 442 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 SLC36A4Q6YBV0 504 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 BHLHA9Q7RTU4 235 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 TRMT11Q7Z4G4 463 aaKnown RBP16.75■□□□□ 0.27
RAB40C-202ENST00000509637 GOLGA5Q8TBA6 731 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 SORCS1Q8WY21 1168 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 TAF4BQ92750 862 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 PIWIL1Q96J94 861 aaKnown RBP16.75■□□□□ 0.27
RAB40C-202ENST00000509637 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 DNAAF2Q9NVR5 837 aaKnown RBP16.75■□□□□ 0.27
RAB40C-202ENST00000509637 FAM13BQ9NYF5 915 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 WSB2Q9NYS7 404 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-202ENST00000509637 WDR35Q9P2L0 1181 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 DNMT3LQ9UJW3 386 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 MAPK8IP1Q9UQF2 711 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 ZDHHC9Q9Y397 364 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 MSRB2Q9Y3D2 182 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 PKD1L2Q7Z442 2459 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 FAM221BA6H8Z2 402 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 TULP2O00295 520 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 HMBSP08397 361 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 CD58P19256 250 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 GFPT1Q06210 699 aaPredicted RBP16.74■□□□□ 0.27
RAB40C-202ENST00000509637 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 CCDC186Q7Z3E2 898 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 RAB44Q7Z6P3 723 aaPredicted RBP16.74■□□□□ 0.27
RAB40C-202ENST00000509637 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 TATDN2Q93075 761 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 EEF2KMTQ96G04 330 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 XPO6Q96QU8 1125 aaKnown RBP16.74■□□□□ 0.27
RAB40C-202ENST00000509637 ARID3AQ99856 593 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 DUSP16Q9BY84 665 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 IL21RQ9HBE5 538 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 USP36Q9P275 1121 aaKnown RBP16.74■□□□□ 0.27
RAB40C-202ENST00000509637 THAP10Q9P2Z0 257 aaPredicted RBP16.74■□□□□ 0.27
RAB40C-202ENST00000509637 NAGPAQ9UK23 515 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 SLC27A6Q9Y2P4 619 aa16.74■□□□□ 0.27
RAB40C-202ENST00000509637 A0A1W2PQD8 194 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 GABBR2O75899 941 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 CLSTN1O94985 981 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 PRKCHP24723 683 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 KIAA1324Q6UXG2 1013 aaKnown RBP16.73■□□□□ 0.27
RAB40C-202ENST00000509637 SLCO6A1Q86UG4 719 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 ZNF276Q8N554 614 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 PNPLA1Q8N8W4 532 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 SLC4A11Q8NBS3 891 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 C1orf216Q8TAB5 229 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 CEP76Q8TAP6 659 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 ZCCHC14Q8WYQ9 949 aaKnown RBP16.73■□□□□ 0.27
RAB40C-202ENST00000509637 NT5C1AQ9BXI3 368 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 SLC32A1Q9H598 525 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 MMRN2Q9H8L6 949 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 CYP3A43Q9HB55 503 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 ITM2CQ9NQX7 267 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 AGO1Q9UL18 857 aaKnown RBP16.73■□□□□ 0.27
RAB40C-202ENST00000509637 PCDHA5Q9Y5H7 936 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 CKAP5Q14008 2032 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 WDFY3Q8IZQ1 3526 aa16.73■□□□□ 0.27
RAB40C-202ENST00000509637 GFRA2O00451 464 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 OPHN1O60890 802 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 CBFA2T3O75081 653 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 ZNF217O75362 1048 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-202ENST00000509637 COPAP53621 1224 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 RAD23BP54727 409 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 RING1Q06587 406 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 DPYDQ12882 1025 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 CEP57L1Q8IYX8 460 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 DNASE2BQ8WZ79 361 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 TOE1Q96GM8 510 aaKnown RBP16.72■□□□□ 0.27
RAB40C-202ENST00000509637 PNPLA8Q9NP80 782 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 RASAL2Q9UJF2 1139 aa16.72■□□□□ 0.27
RAB40C-202ENST00000509637 LSM7Q9UK45 103 aaKnown RBP16.72■□□□□ 0.27
RAB40C-202ENST00000509637 MAPK13O15264 365 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 RHOBTB3O94955 611 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 KIF20AO95235 890 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 P4HA1P13674 534 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 CMA1P23946 247 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 CD6P30203 668 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 CORO1AP31146 461 aaKnown RBP16.71■□□□□ 0.27
RAB40C-202ENST00000509637 NDUFA8P51970 172 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 EFEMP1Q12805 493 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 GRIK2Q13002 908 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 COL9A2Q14055 689 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-202ENST00000509637 ZNF234Q14588 700 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 NFIL3Q16649 462 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 RAB41Q5JT25 222 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 METTL3Q86U44 580 aaKnown RBP16.71■□□□□ 0.27
RAB40C-202ENST00000509637 PIGZQ86VD9 579 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 MARCH9Q86YJ5 346 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 DENND1CQ8IV53 801 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 ZC3H3Q8IXZ2 948 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms