RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 SMARCAD1Q9H4L7 1026 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 STN1Q9H668 368 aaKnown RBP13.51□□□□□ -0.25
CAST-223ENST00000508608 SMYD2Q9NRG4 433 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 DNAJB4Q9UDY4 337 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 PCDHA11Q9Y5I1 949 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 EIF4E1BA6NMX2 242 aaKnown RBP13.51□□□□□ -0.25
CAST-223ENST00000508608 RBP5P82980 135 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 POU5F1BQ06416 359 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 STX3Q13277 289 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 GOLGA7BQ2TAP0 167 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 PRAMEF18Q5VWM3 479 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 SESTD1Q86VW0 696 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 RBM15BQ8NDT2 890 aaKnown RBP13.51□□□□□ -0.25
CAST-223ENST00000508608 STKLD1Q8NE28 680 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 PPP1R14CQ8TAE6 165 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 DTX3LQ8TDB6 740 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 ZNF668Q96K58 619 aaPredicted RBP13.51□□□□□ -0.25
CAST-223ENST00000508608 RILPQ96NA2 401 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 ZNF184Q99676 751 aaPredicted RBP13.51□□□□□ -0.25
CAST-223ENST00000508608 SPATC1LQ9H0A9 340 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 MINDY3Q9H8M7 445 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 PLAC1Q9HBJ0 212 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 THAP1Q9NVV9 213 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 BTBD7Q9P203 1132 aa13.51□□□□□ -0.25
CAST-223ENST00000508608 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 PIK3R2O00459 728 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 GRAP2O75791 330 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 GJB1P08034 283 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 CPA2P48052 419 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 NR2C2P49116 596 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 CLCN3P51790 818 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 AP2B1P63010 937 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 GSTA3Q16772 222 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 RAB6CQ53S08 254 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 MAP1SQ66K74 1059 aaPredicted RBP13.5□□□□□ -0.25
CAST-223ENST00000508608 OLFML1Q6UWY5 402 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 CYS1Q717R9 158 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 TREML1Q86YW5 311 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 ZDHHC17Q8IUH5 632 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 WDR75Q8IWA0 830 aaKnown RBP13.5□□□□□ -0.25
CAST-223ENST00000508608 ACMSDQ8TDX5 336 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 TRAPPC12Q8WVT3 735 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 PIWIL1Q96J94 861 aaKnown RBP13.5□□□□□ -0.25
CAST-223ENST00000508608 SIGLEC10Q96LC7 697 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 SPATA33Q96N06 139 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 CCDC106Q9BWC9 280 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 RAB6CQ9H0N0 254 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 FAM96AQ9H5X1 160 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 NRDE2Q9H7Z3 1164 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 C2CD2Q9Y426 696 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 NFKBIEO00221 500 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 ARIH2O95376 493 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 CYP3A5P20815 502 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 SP100P23497 879 aaPredicted RBP13.5□□□□□ -0.25
CAST-223ENST00000508608 SLC6A3Q01959 620 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
CAST-223ENST00000508608 MROH9Q5TGP6 573 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
CAST-223ENST00000508608 MAGEA13PA6NCF6 341 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 A6NJR5 290 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 AHCYL1O43865 530 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 UGT1A9O60656 530 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 FESP07332 822 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 CYP2F1P24903 491 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 KDSRQ06136 332 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 SEMA5AQ13591 1074 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 PPP6R3Q5H9R7 873 aaPredicted RBP13.49□□□□□ -0.25
CAST-223ENST00000508608 TREML2Q5T2D2 321 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
CAST-223ENST00000508608 ZNF534Q76KX8 674 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 CDKL2Q92772 493 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 ATP2A3Q93084 1043 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 QKIQ96PU8 341 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAST-223ENST00000508608 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
CAST-223ENST00000508608 PDZD7Q9H5P4 517 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 UGT1A7Q9HAW7 530 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 UGT1A10Q9HAW8 530 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 UGT1A8Q9HAW9 530 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 GPAMQ9HCL2 828 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 DLGAP2Q9P1A6 1054 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 MARCOQ9UEW3 520 aaPredicted RBP13.49□□□□□ -0.25
CAST-223ENST00000508608 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.49□□□□□ -0.25
CAST-223ENST00000508608 CYB561D2O14569 222 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 GLRA3O75311 464 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 PFKMP08237 780 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 KITP10721 976 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 AOC1P19801 751 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 AMPD1P23109 780 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 RGS7P49802 495 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
CAST-223ENST00000508608 ACTR3P61158 418 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 NAB1Q13506 487 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 DPYSL2Q16555 572 aa13.49□□□□□ -0.25
CAST-223ENST00000508608 HSF5Q4G112 596 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms